Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0844 ATGCCACAACCACGAGAGCTTCCGGGGTTTTACTATGACCCAGAGAAGAATAGATACTTCCCTATCAAAGGTCCTATACCTGGTTCTTCTCGTTCTTCTTCAAAGCTCACTACTCAAAAGTCTCCTCAAACAACCTTATTGACTCAGGAAAGGAAGAGTTCTTGTAGGAAGCTCAGAAACAGCATGTCTAAGCTTCTTCAGGCCAGGGAGTTAGATGGACATGTCATTGCTTCCAAGTCTCACAGTTGCAAGTGCAACTTCACTGAGGAATTCAGAAAGATACAAGCATCACAACCTGTTGTCTGGAAATACAGGGGGACAGATGGCATAAATTTTAGTGCTTTAGAGCAGATGCACATTGATGTGCAGACAGAAGGGGGTCAATATAAAACTGATGTTTTATTGACTGGGGGCATGAATGGCTCGTTGAGTTTTTCAGAAATTGGAAGGATTGGGCAACGTTTTGATGGCGCATTAGAATGGACACCACATTGTGTTAAGAATTATGTTAAAAGGAAGGCTGATGAGCAGAATGAGGTGCCTGGGCCGGTTTACAGTCCAAATTCACTGCTTATGTCCTCCAGTATATCTTGTATAAGAAAGTGCTCTTCTCAGGCTGCAAACGATAGTCCTATTGTTGGACATGCACTATTTACTACTTTGGGATCAGAGACATCAGGTGGATCAGTTTATACTATCAGTATCAATGAACCATTAGATCTTGGGCCTGGTATACTGAACACATGGAGCAGTATAGAGGAAGTTGCTTCTTTCAAGTGTACTCTTTGGACAGCAGAACATGATTATAATAGACATCGGGCTGTAATTGGTACCAACCGGGGAGCTGCTTCAGTGGATTTGGAAACTGGCACAACATCATGGTTTTTACGCTGTAAAAGTGATGTGTTTGCACAACAAATTGTAAATTCAGGAAATGTCATTTTATGTGGACTCAGAAATGGGGCAATTGTCACTGTCGATTTCCGTGAGAAAAGGGAAAGGCTTTCCAGTAGGCTTATTAAACACCGTATACCTTATTCATCTTCAAACAAGAAATCCGGAAGTTCAAATAAAGAATGGTTCGAGCTCACCGGAGACATATATCCTTCTCATACCATTAGGATGCCTAGATCTATATCCTGTCTGCTGTCACTTCAGTTTGATGATCAGTACTTTCTTGCAAGCTCCATGGATGGATCGATGAAGCTCTACGATCGACGCTTACTCCAGAGAGGTGCTGTTCAATCTTATGAAGGACATGTGAATTCGCATACTCGTATACAGCTTGGGGTTGATCCAGCCGAGAGATTTGTTATGTCAGGTGGAGAAGATTGCAGCCTACGGGTATGGAGTATTAAGTCTGGTGAACTTCTTTTCGAGGACAAGTTCTCCGATTCAGTTCTCTCCACCGTGTGCTTCCAAACGCGTAAAAGTTTCAAAGAAGAGAACGAAAACCAAAACAAGCATCAGTCTTCTCTGGGTGCGTGGCTTGGATCACGTGATGGACTATTTTATATGCATTGGCCATGA 1530 0.4261 MPQPRELPGFYYDPEKNRYFPIKGPIPGSSRSSSKLTTQKSPQTTLLTQERKSSCRKLRNSMSKLLQARELDGHVIASKSHSCKCNFTEEFRKIQASQPVVWKYRGTDGINFSALEQMHIDVQTEGGQYKTDVLLTGGMNGSLSFSEIGRIGQRFDGALEWTPHCVKNYVKRKADEQNEVPGPVYSPNSLLMSSSISCIRKCSSQAANDSPIVGHALFTTLGSETSGGSVYTISINEPLDLGPGILNTWSSIEEVASFKCTLWTAEHDYNRHRAVIGTNRGAASVDLETGTTSWFLRCKSDVFAQQIVNSGNVILCGLRNGAIVTVDFREKRERLSSRLIKHRIPYSSSNKKSGSSNKEWFELTGDIYPSHTIRMPRSISCLLSLQFDDQYFLASSMDGSMKLYDRRLLQRGAVQSYEGHVNSHTRIQLGVDPAERFVMSGGEDCSLRVWSIKSGELLFEDKFSDSVLSTVCFQTRKSFKEENENQNKHQSSLGAWLGSRDGLFYMHWP* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0844 509 MobiDBLite consensus disorder prediction 27 51 - -
Lan19g0844 509 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 12 507 - -
Lan19g0844 509 MobiDBLite consensus disorder prediction 1 53 - -
Lan19g0844 509 PANTHER KATANIN P80 SUBUNIT 12 507 - -
Lan19g0844 509 Pfam WD domain, G-beta repeat 414 451 IPR001680 GO:0005515
Lan19g0844 509 ProSiteProfiles Trp-Asp (WD) repeats profile. 417 460 IPR001680 GO:0005515
Lan19g0844 509 SUPERFAMILY WD40 repeat-like 226 472 IPR036322 GO:0005515
Lan19g0844 509 Gene3D - 256 493 IPR015943 GO:0005515
Lan19g0844 509 SMART WD40_4 410 451 IPR001680 GO:0005515
Lan19g0844 509 SMART WD40_4 366 405 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0844 390 474 Miscellaneous Gene Families AT5G08390 29.412 5.65e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0844 K11799 - gmx:100798753 750.74