Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0842 ATGAAACTCTGCATGGCTTTTCACAAAAACATCATAGTTTCTGTCTTTGTCTTATGTTTGTTCTTGTTCCTTGTTGTAAGTTATGTTGATGGAAGGTTTGTGGTGGAGAAGAGCAGCATCAAGGTTTTGTCTCCACAGAAACTGAGGTCAAACCATGATGGTGCCATAGGAAACTTCGGTATACCAGATTATGGAGGTTTCATGGTTGGTTCTTTGGTTTATCCTGAGAAAGGGAATCATGGGTGTCAACCCTTTGAGGGTGATAAGCCCTTCAAGTTTAGGTCCTATCGTCCCACTTTTGTTCTTCTTGATCGTGGAGAGTGTTACTTTGCCTTAAAGGTTTGGCATGCCCAACTAGCTGGAGCTGCAGCAGTTTTAGTGACTGACACCTTGGACGAGCCTCTGCTAACTATGGATACTCCCGAGGAGAGCAAAGATGCAGATGGCTACATAGAGAAGATTGGAATTCCATCAGCACTGATAGAGAAATCCTTCGGTGACACGTTGAAGGAAGCTTTAAATAACAAAGACGAAGTTTTGCTAAGAATAGACTGGAGAGAGTCAGTACCTCACCCTGATAATAGAGTTGAGTATGAGTTCTGGACCAACAGCAATGATGAATGTGGAGTTCGATGCGATGAGCAAATGGATTTTGTGAAGAATTTTAAGGGTCATGCTCAAATTCTTGAGAGAGGTGGTTATACCTTATTCACTCCACATTATATAACTTGGTTCTGTCCAAAACCTTTTGTACTTACGAGTCAATGCAAGTCTCAATGCATAAACAATGGGAGGTATTGTGCACCAGATCCAGAGAAGGATTTTGGAGAGGGTTATCAAGGGAAGGACGTAGTTTATGAAAATTTAAGGCAACTATGTGTCCATAGAGTTGCCAATGAGACCAACCGTTCGTGGGTCTGGTGGGACTATGTGACAGATTTCCATGTCAGATGTTCTATGAAGGAGAAAAGATACAGCAAAGAGTGTGCTGATGATGTCATGAGATCACTCGATTTGCCTATTGAGAAAATTAAGAAATGCATGGGTGACCCTGAAGCGGACGAAGAGAATGAAGTCCTAAAAACTGAGCAACAACTCCAGATTGGGCAAGGATCTCGAGGTGATGTTACCATCTTGCCGACATTGGTTGTAAACAATGTCCAGTATCGAGGAAAACTGGAGAGAACTGCTGTCCTGAAGGCTTTATGTGCTGGATTTAAGGAGACTACCGAACCTGCAGTTTGTTTAACTGGAGATGTCGAGACTAATGAGTGTCTTGAAAGAAATGGAGGATGTTGGCAGGACAAAGATGCTAACATAACTGCTTGCAAGGATACTTTCCGGGGAAGAGTTTGTGAGTGCCCTGTTTTGAATGGTGTTCAGTACAGGGGTGATGGTTATACATCATGTGAAGCTTTTGGACCTGCAAGGTGTTCAATAAACAATGGAGGTTGCTGGTCAGAAACTAAAAATGGATTAACGTTCTCAGCTTGCTCAGAGTCTAAGATAAATGGCTGTCAGTGCCCGGTTGGGTTTCGGGGAGATGGCAAGAAATGTGAAGGTATTGATGAATGTAAGGAAAGAAGTGCTTGTCAGTGTGATGGATGTAGCTGCAAAGACACTTGGGGTGGCTATGATTGTAAGTGCAAGGGAGATCTTCTGTATATAAAGGAACAGGATGTTTGTATCGAAAGAAGTGGATCAAAATCTGGACGGATCCTCGCATTTGTAGTAGTAGCAGTCGTTGCTGGTGCTGCTCTAGCTGGTTATATATTCTACAAATACAGGCTCCGGTCTTACATGGACTCAGAGATCATGGCTATCATGTCACAATACATGCCGCTCGACCAGCAAAATAATGAAGTTCAAGCCGAAGTGCAGCCTTTACGACAACAAGGCGCTGTATAA 1908 0.4298 MKLCMAFHKNIIVSVFVLCLFLFLVVSYVDGRFVVEKSSIKVLSPQKLRSNHDGAIGNFGIPDYGGFMVGSLVYPEKGNHGCQPFEGDKPFKFRSYRPTFVLLDRGECYFALKVWHAQLAGAAAVLVTDTLDEPLLTMDTPEESKDADGYIEKIGIPSALIEKSFGDTLKEALNNKDEVLLRIDWRESVPHPDNRVEYEFWTNSNDECGVRCDEQMDFVKNFKGHAQILERGGYTLFTPHYITWFCPKPFVLTSQCKSQCINNGRYCAPDPEKDFGEGYQGKDVVYENLRQLCVHRVANETNRSWVWWDYVTDFHVRCSMKEKRYSKECADDVMRSLDLPIEKIKKCMGDPEADEENEVLKTEQQLQIGQGSRGDVTILPTLVVNNVQYRGKLERTAVLKALCAGFKETTEPAVCLTGDVETNECLERNGGCWQDKDANITACKDTFRGRVCECPVLNGVQYRGDGYTSCEAFGPARCSINNGGCWSETKNGLTFSACSESKINGCQCPVGFRGDGKKCEGIDECKERSACQCDGCSCKDTWGGYDCKCKGDLLYIKEQDVCIERSGSKSGRILAFVVVAVVAGAALAGYIFYKYRLRSYMDSEIMAIMSQYMPLDQQNNEVQAEVQPLRQQGAV* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0842 635 Gene3D - 30 192 - -
Lan19g0842 635 Gene3D Laminin 415 471 - -
Lan19g0842 635 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN-CONTAINING PROTEIN-RELATED 16 611 - -
Lan19g0842 635 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 16 611 - -
Lan19g0842 635 Pfam PA domain 70 169 IPR003137 -
Lan19g0842 635 SUPERFAMILY PA domain 97 178 IPR046450 -
Lan19g0842 635 CDD EGF_CA 522 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0842 Lan-Chr19 15211914 15217821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0842 7 632 Miscellaneous Gene Families AT1G30900 70.288 0.0 961
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0842 - - gmx:100790467 1161.75