Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0838 ATGAGTTCTTCTAACATTGCCACCTTTGTCTCAAGCTTCAAACCCATTACTATTGTTTTTTGCTTCTTCTTCTTTTGTCTCCTATCACCTTCTTCACGCGCTTCTTCTATATTTTCTGGTAATGGAACTGTAGATTTAGAAAATAGTGGTGATTTGTTTCCACAGATTCTAAGAGATGAAGCAGTGGCAAGACTCTATGACCTTGGGAAGGTCAGTGATGCTAGTGGCTATCTGGAGAGGACGTTTTTGAGTCCTGCATCCATGAGGGCAATTGATGTTATCCGTAAATGGATGGAAGACGCTGGTTTGAGAACATGGGTGGACCACATGGGAAATTTACATGGTCGAGCTGACGGTGCAAATGCAAATGCCGAGGCTTTATTGATCGGATCTCACATGGACACTGTTGTTGATGCTGGGATTTTTGATGGATCACTTGGAATAGTCTCTGCAATATCTGCATTAAAGGTTATGTTTATCAACGGAAAGCTGCAAAAGCTAAGGCGCCCTGTTGAGGTGATTGCATTTAGTGATGAAGAGGGTGTCAGGTTTCAAACTACTTTCTTGGGAAGTGGTGCTGTAGCTGGAATTTTTCCTGCTACAACATTGGGAGTATCTGATAAGAGGGATGTAACAGTAGAAAGTGTTCTTAAGGAGAACTCAATAGAAGTTACAGAGGAAAGTTTTTTACAGCTCAAATATGATCCGAAATCAGTTTGGGGTTATGTCGAGGTTCACATTGAGCAGGGTCCTGTGCTAGAACAAGTTGGTTTCCCACTCGGTGTGGTTAAAGGCATTGCCGGGCAGACACGATTGAAGGTTACAGTTAGAGGATCACAAGGTCATGCTGGAACGGTTCCAATGTCCATGCGCCAGGATCCTATGGTTGCTGCTGCTGAATTAATTTTAGTTATGGAGAGCCTATGTAAAAATCCTGAAAAATACCTTTCTTATGATTATCAATGCAGCGATTCAACACTCAAATCACTTTCCAGTTCTCTAGTCTGCACTGTTGGAGAGATATCAACATGGCCAAGTGCCAGTAACGTCATTCCAGGCCAGGTCACATATACTGTGGATATAAGAGCAATTGACGACCTTGGACGTGAGGCTGTCATTTATGATTTATCCAAACGAATTTATCAAATATGTGACAAGCGTTCAGTTTCATGCATTATTGAACACAAGCATGATGCTGGTGCTGTGATTTGTGCTTCCAAACTTAGCTCACAGCTCAAGTCCGCAGCTTCTTCTGCACTCAAGAGAATGGAGGGCGACATCGAGTTTGAGGTGCCAACACTAATGAGTGGTGCGGGGCATGATGCAATGGCAATGTCTCACTTAACTAAGGTGGGAATGTTGTTTGTGCGATGCCGTGGAGGCATAAGTCACTCTCCACAAGAACATGTTCTAGACAATGATGTTTGGGCTGCTGGTTTAGGAACCTTGTCATTTATGGAGAATATGCAATAA 1473 0.4291 MSSSNIATFVSSFKPITIVFCFFFFCLLSPSSRASSIFSGNGTVDLENSGDLFPQILRDEAVARLYDLGKVSDASGYLERTFLSPASMRAIDVIRKWMEDAGLRTWVDHMGNLHGRADGANANAEALLIGSHMDTVVDAGIFDGSLGIVSAISALKVMFINGKLQKLRRPVEVIAFSDEEGVRFQTTFLGSGAVAGIFPATTLGVSDKRDVTVESVLKENSIEVTEESFLQLKYDPKSVWGYVEVHIEQGPVLEQVGFPLGVVKGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMVAAAELILVMESLCKNPEKYLSYDYQCSDSTLKSLSSSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKRIYQICDKRSVSCIIEHKHDAGAVICASKLSSQLKSAASSALKRMEGDIEFEVPTLMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPQEHVLDNDVWAAGLGTLSFMENMQ* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0838 490 PANTHER ALLANTOATE DEIMINASE-RELATED 50 483 IPR010158 GO:0016813
Lan19g0838 490 Pfam Peptidase family M20/M25/M40 128 475 IPR002933 GO:0016787
Lan19g0838 490 Gene3D - 268 400 - -
Lan19g0838 490 PANTHER ALLANTOATE DEIMINASE-RELATED 50 483 - -
Lan19g0838 490 SUPERFAMILY Bacterial exopeptidase dimerisation domain 268 400 IPR036264 -
Lan19g0838 490 Gene3D Zn peptidases 72 477 - -
Lan19g0838 490 Pfam Peptidase dimerisation domain 268 380 IPR011650 -
Lan19g0838 490 CDD M20_bAS 62 478 - -
Lan19g0838 490 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 127 136 IPR001261 -
Lan19g0838 490 SUPERFAMILY Zn-dependent exopeptidases 53 488 - -
Lan19g0838 490 TIGRFAM hydantase: amidase, hydantoinase/carbamoylase family 63 480 IPR010158 GO:0016813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0838 Lan-Chr19 14923032 14934643 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0838 K02083 - gmx:100137075 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0097 4 1378351 1384101 Lan19g0838 19 14923032 14934643 LSH