Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0836 ATGGAAGATGAAATTCTCATAGAGGAGTGTGAAGTTGCCGAAAAGGGTTTCAAGGAAAAACCTGCTCGAGTCTATGCAGATGGGATTTATGATCTCTTTCACTTCGGCCATGCCCGTTCTCTTGAGCAAGCCAAAAAACTATTTCAAAATACTTATCTCCTTGTTGGATGCTGCAATGATGAAATTACCTACAAGTATAAGGGCAAAACTGTTATGAATGAGAAGGAACGCTACGAGTCTCTTCGCCACTGCAGGTGGGTTGACGAAGTTATTCCAGATGCACCATGGGTAATCACACAGGAGTTCATTGATAAGCATCAAATTGACTATGTGGCACATGATTCTCTTCCTTATGCTGATGCAAGTGGAGCTGGAAAGGATGTCTATGAATTTGTTAAGTATATTGGAAAATTTAAGGAAACAAAGCGGACTGAAGGAATTTCTACTTCAGATATGATAATGAGAATTATCAGAGATTATAACCAGTATGTAATGCGTAATTTGGACCGTGGTTATACAAGAAAGGATCTAGGTGTCAGCTATGTCAAGGAAAAGAGGTTGAGAATGAACATGGGATTTAAGAAATTGCGTGAAAGAGTGAAGAAACAGCAAGAGAAAGTGGGAATGAAGATACAAACTGTGGCAAAAACTGCTGGAATGCACCGTGATGAATGGGTCGAAAATGCGGATCGATTGGTTGTTGGATTTCTGGAGATGTTTGAAGAAAGCTGCCACAAAATGGGAACAGCAATCAGAGACAGAATCCAAGAACGACTAAGGACGCAGCAGCTAAAAGCTCTTCTTTACGACGTGTGGGAAGATGATGATGGTGATGATGATGAGGACGATGAATTATTATACACCGATGATCAATCTTTAGGATATTTCAGTCACTAA 897 0.4013 MEDEILIEECEVAEKGFKEKPARVYADGIYDLFHFGHARSLEQAKKLFQNTYLLVGCCNDEITYKYKGKTVMNEKERYESLRHCRWVDEVIPDAPWVITQEFIDKHQIDYVAHDSLPYADASGAGKDVYEFVKYIGKFKETKRTEGISTSDMIMRIIRDYNQYVMRNLDRGYTRKDLGVSYVKEKRLRMNMGFKKLRERVKKQQEKVGMKIQTVAKTAGMHRDEWVENADRLVVGFLEMFEESCHKMGTAIRDRIQERLRTQQLKALLYDVWEDDDGDDDEDDELLYTDDQSLGYFSH* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0836 298 CDD CCT 20 171 IPR041723 -
Lan19g0836 298 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 23 90 IPR004821 GO:0003824|GO:0009058
Lan19g0836 298 Pfam Cytidylyltransferase-like 25 153 IPR004821 GO:0003824|GO:0009058
Lan19g0836 298 PANTHER CYTIDYLYLTRANSFERASE 6 288 IPR045049 GO:0004105|GO:0006657
Lan19g0836 298 PANTHER CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE 2-LIKE ISOFORM X1 6 288 - -
Lan19g0836 298 Gene3D HUPs 2 242 IPR014729 -
Lan19g0836 298 SUPERFAMILY Nucleotidylyl transferase 23 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0836 Lan-Chr19 14876481 14881773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0836 41 298 Acyl Lipid Metabolism Gene Families AT2G32260 69.767 2.80e-129 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0836 K00968 - gmx:100786249 486.108