Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0617 ATGGCTATGAGTACTTCTGATCTATTATCCAAACTCAATCCAACTCAGCATTTCCCTCTACACTCTCTCCTCCACTATTGCTCTTCAAACGTTTCTGGATTCCCTCATTCTCCCTCTCATTTCACCATCTCCCAGTTTGGGCATGGACAATCTAACCCAACTTACTTGTTGGAAGTGGGTGCTGAGGGCTCTGTGGTGAAGCGATATGTTCTGAGGAAGAAACCTCCTGGAACGTTGTTGGCTTCAGCTCATGCTGTTGACAGAGAGTTTCAGGTTCTCCAGGCGTTAGGTACTCATACTGAAGTTCCAGTCCCTAAAGTTTTCTGTTTATGCAATGATCCAGCTGTTATTGGAACGGCATTTTATATCATGGAGTTTTTGGAGGGACGCATATATATTGATCCCAAGCTACCAGCTGTGGCACCGGAGACAAGGAGGGCAATTTATCTGGAAACTGCTAGGACATTAGCTTCCTTACATTCTTCTAATGTGGACTCAATTGGTCTGGGAAAATATGGACGACGTAATGATTATTGCAAAAGAACGATTGAGAGGTGGGCTAAGCAATATATCGCCTCGACCAGTGAGGGTAAACCTGCAAGAAATCAAAAAATGTTTGCCCTGATTGATTGGCTAAAGAGTCAAATCCCCCCGGAAGATTCATCAGGAGCAACAGCAGGTCTGGTTCATGGGGACTTTCGTATTGACAATCTTGTGTTCCATCCTACAGAGGATCGAGTAATCGGCATACTTGACTGGGAACTGTCTACCCTTGGTAACCAAATGTGTGATGTCGCATATAGCTGTTTGCCTTATATTGCAGACATTGGACATGACAAAGTACAGCAAGGTCTTGAAGTTTCTGGATTACCAGAGGGAATTCCTTCACTACCAGAATATTTGGCTGAATACTGCTCTTTGGCAGGAAGAAAATGGCCTCTTGCTGAGTGGAAGTTCTATGTTGCCTTCTCTTTGTTCCGCGGGGCTTCAATTTTTGCAGGCGTGTATAGTAGATGGGTTAAGGGTAATGCATCAGGAGGTGAACGTGCTCGGTACACAGGGAAACTTGCAAATGAACTTATTGATGCTGCTTGGAAATTTATCGAAATGAAATCTGTGCTCCCTCAGCATCCTCCATCTGTTGCAAATGCACGACACTATTCAAAAGAGTTGGTAACTGAGAAAGATACGCTGGGCCACTCAAATGGGAGAAGGTTTATTCCTAGTCAAAAGGTTTTGACTCTGAGGAACAAACTAATTAAGTTCATGGAGGAACACATATACCCCATGGAAAATGAATTTTATAAACTTGCCCAGTCAGAATCACGTTGGACTGTTCACCCAGCAGAAGGGGAGTTGAAGGAGTTAGCAAAGAAAGAAGGCTTGTGGAACTTATTTATTCCTCTTGATAGTGCTGCCAGAGCAAAAAAGCTTCTTTTTGGTGGGAGCAATAATGATCTCTCTAGTGATGCAAATAACTTGTTATTGGGTGCTGGTCTGACAAATCTCGAATATGGATACCTTTGTGAGATTATGGGTCGTTCTATGTGGGCTCCACAAGTGTTTAATTGTGGTGCACCTGACACGGGTAACATGGAGGTGTTACTGCGCTATGGCAATAAAGAACAACAACGAGAATGGCTTATTCCTTTGCTTGAGGGGAAGATTAGGTCTGGATTTGCAATGACAGAACCACAAGTTGCATCTTCTGATGCAACCAATATTGAGTGTTCTATCAGAAGGCAAGGAGATTCATATATTATCAATGGGACGAAATGGTGGACAAGTGGTGCTATGGATCCAAGATGCAAAGTTCTTATAGTCATGGGGAAAACTGATTTCAATGCAGCGATGCATAAGCAACAGTCCATGATCTTAGTGGATATCCAGACTCCTGGTGTTCACGTAAAAAGACCATTGTTGGTGTTTGGCTTTGATGATGCACCTCATGGGCACGCAGAAGTAACATTTGAAAATGTCCGTGTGCCAGCAAAAAATGTCCTGCTGGGTGAAGGATGTGGCTTTGAGATCGCTCAAGGTAGGTTAGGTCCAGGAAGGCTGCACCATTGTATGAGACTGGTAGGTGCTGCTGAGCGAGGCATGCAATTGATGGCTCAAAGAGCTGTTAGTAGAAAAACATTTGGGAAGTTTATTGCTCAACATGGTTCATTTCTTTCTGATATGGCCAAGTGCCGAATAGAGCTAGAGAAGACCAGACTGTTGGTGTTGGAAGCAGCTGACCAGCTTGACAGGCATGGGAACAAAAAAGCTAGAGGGATATTAGCAATGGCCAAGGTAGCCGCACCAAACATGGCACTGAAGGTGCTTGACATGGCAATTCAAGTGCATGGAGCAGCTGGTGTATCATCTGACACAGTCCTAGCACATCTGTGGGCAGGTGCAAGGACATTGAGGATTGCAGACGGTCCAGATGAAGTCCACTTGGGTACCATAGCCAAGTTAGAACTACAGAAAGCCAAGCTTTGA 2487 0.4427 MAMSTSDLLSKLNPTQHFPLHSLLHYCSSNVSGFPHSPSHFTISQFGHGQSNPTYLLEVGAEGSVVKRYVLRKKPPGTLLASAHAVDREFQVLQALGTHTEVPVPKVFCLCNDPAVIGTAFYIMEFLEGRIYIDPKLPAVAPETRRAIYLETARTLASLHSSNVDSIGLGKYGRRNDYCKRTIERWAKQYIASTSEGKPARNQKMFALIDWLKSQIPPEDSSGATAGLVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQMCDVAYSCLPYIADIGHDKVQQGLEVSGLPEGIPSLPEYLAEYCSLAGRKWPLAEWKFYVAFSLFRGASIFAGVYSRWVKGNASGGERARYTGKLANELIDAAWKFIEMKSVLPQHPPSVANARHYSKELVTEKDTLGHSNGRRFIPSQKVLTLRNKLIKFMEEHIYPMENEFYKLAQSESRWTVHPAEGELKELAKKEGLWNLFIPLDSAARAKKLLFGGSNNDLSSDANNLLLGAGLTNLEYGYLCEIMGRSMWAPQVFNCGAPDTGNMEVLLRYGNKEQQREWLIPLLEGKIRSGFAMTEPQVASSDATNIECSIRRQGDSYIINGTKWWTSGAMDPRCKVLIVMGKTDFNAAMHKQQSMILVDIQTPGVHVKRPLLVFGFDDAPHGHAEVTFENVRVPAKNVLLGEGCGFEIAQGRLGPGRLHHCMRLVGAAERGMQLMAQRAVSRKTFGKFIAQHGSFLSDMAKCRIELEKTRLLVLEAADQLDRHGNKKARGILAMAKVAAPNMALKVLDMAIQVHGAAGVSSDTVLAHLWAGARTLRIADGPDEVHLGTIAKLELQKAKL* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0617 828 Pfam Phosphotransferase enzyme family 43 269 IPR002575 -
Lan19g0617 828 Gene3D - 129 372 - -
Lan19g0617 828 CDD ACAD10_11_N-like 42 308 IPR041726 -
Lan19g0617 828 Gene3D - 558 672 IPR046373 GO:0016627
Lan19g0617 828 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 671 824 IPR036250 GO:0016627
Lan19g0617 828 PANTHER ACYL-COA DEHYDROGENASE IBR3-RELATED 1 828 - -
Lan19g0617 828 Pfam Acyl-CoA dehydrogenase, middle domain 559 660 IPR006091 GO:0016627
Lan19g0617 828 Gene3D - 408 556 IPR037069 GO:0016627|GO:0050660
Lan19g0617 828 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 406 685 IPR009100 GO:0016627
Lan19g0617 828 Gene3D Phosphorylase Kinase; domain 1 20 128 - -
Lan19g0617 828 SUPERFAMILY Protein kinase-like (PK-like) 40 343 IPR011009 -
Lan19g0617 828 Gene3D - 674 827 - -
Lan19g0617 828 PANTHER MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED 1 828 - -
Lan19g0617 828 Pfam Acyl-CoA dehydrogenase, C-terminal domain 674 820 IPR009075 GO:0016627
Lan19g0617 828 Pfam Acyl-CoA dehydrogenase, N-terminal domain 414 555 IPR013786 GO:0016627|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0617 Lan-Chr19 11558739 11566979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0617 1 826 Acyl Lipid Metabolism Gene Families AT3G06810 75.392 0.0 1300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0617 K00249 - gmx:100788184 1433.31