Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0516 ATGGCTGCTGCCATGGCTGGGTTGTATCGTCGTTTACTAGCTTCTCCCCCTTCCATCGATTTCGCTTCTTCTCAAGGCAAGCAACTTTTCCTTGAAGCAATTCAGAATGGAACTATGGAAGGCTTTTATAGATTGGTATCTTATTTTCAAACACAATCGGAGCCTGCTTATTGTGGCCTTGCAAGCTTATCCATGGTCTTGAATGCTCTGGCCATTGATCCTGGCAGGAAATGGAAAGGACCTTGGAGATGGTTTGATGAATCTATGTTGGACTGTTGTGAACCTCTAGAAAAGGTCAAAGCTAGAGGCATCTCATTTGGGAAATTAGTGTGTCTAGCTCATTGTGCTGGTGCACAAGTTGAAGCCTTTCATGCAAGCCATAGCAGCATTGATGATTTTCGTAAATATGTCAAGAAGTGTTCGACTTCGGATGAGTGTCATGTGATCTCATCATACCATAGAGCTGCTCTCAAGCAAACAGGAACTGGCCACTTTTCTCCAATTGGAGGTTATCACATTGGGAAGGACATGGCACTTATTTTGGATGTTGCACGTTTTAAGTATCCTCCTCATTGGGTCCCACTTACACTTCTTTGGGAAGGCATGAACTATGTTGATGAAACCACTGGACAATCCCGAGGATTCATGCTTATATCAAGACCTCACAGGGAACCTGGGATGCTTTATACTCTGAGCTGCAAACATGAGAGTTGGAATAGTATTGCAAAATTCCTAATAGATGATGTTCCTCTTCTATTAAAATCAGAGGATTTGAAAGACATTCATAAGGTTCTTTCAGTCGTAGTCTCATCTCTTCCATCTAATTTTGAAGAATTCATCAAGTGGGTCGCAGAGGTCAGGAGGCGAGAGGATGGCGGTCCAAGTTTAAGTGCAGAGGAGAAAGCAAGGCTTTCTATCAAGGAAGAGGTATTGAAACAGGTGCAAGAGATAGGGCTTTTCAAACATGTGGCCTCCTTTTTGTCACACTCTTGCAGCGTGCACTCACCAACTTCAGGTAATGGGAACACTTTACCGGACATTGCTGCAAGTGTTTGTTGCCAAGGAGCAGAAATTCTAAGTTGGAAACTTAGCTCATCAATGACGTATTGCTGCCAAGAAACATGTTTAGGCTCAAAATCTGAAGACGAGAAGCCAATAACAATGGTTAGTGGGACTGTTGTGAATGGTAACACCGAACACGGGGTTGATGTGCTGATTCCTTCATCACCTAGGAAGTTATGTTGCAATTGCACTTGTGCAAGTAAGAACATTAGTATGTATCCAGCTAGCACTGATGTGCTAACGGTGCTTCTATTATCATTACCGTCTACAACTTGGGATGGCATCAAAGATGAGCAGCTTTTGAGGGAAATAGATGGCCTGGTTTCAACTGAAAATCTTCCTGCATTGCTTCAAGAAGAGGTTCTGCATTTAAGACGTCAGCTACACCTTCTCAAGAGATGTCAAGAGGGTAAGGTAGATGAAGATCTGGGTGCACCTTTGTCTTAG 1509 0.4314 MAAAMAGLYRRLLASPPSIDFASSQGKQLFLEAIQNGTMEGFYRLVSYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKARGISFGKLVCLAHCAGAQVEAFHASHSSIDDFRKYVKKCSTSDECHVISSYHRAALKQTGTGHFSPIGGYHIGKDMALILDVARFKYPPHWVPLTLLWEGMNYVDETTGQSRGFMLISRPHREPGMLYTLSCKHESWNSIAKFLIDDVPLLLKSEDLKDIHKVLSVVVSSLPSNFEEFIKWVAEVRRREDGGPSLSAEEKARLSIKEEVLKQVQEIGLFKHVASFLSHSCSVHSPTSGNGNTLPDIAASVCCQGAEILSWKLSSSMTYCCQETCLGSKSEDEKPITMVSGTVVNGNTEHGVDVLIPSSPRKLCCNCTCASKNISMYPASTDVLTVLLLSLPSTTWDGIKDEQLLREIDGLVSTENLPALLQEEVLHLRRQLHLLKRCQEGKVDEDLGAPLS* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0516 502 SUPERFAMILY Cysteine proteinases 15 219 IPR038765 -
Lan19g0516 502 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 5 494 - -
Lan19g0516 502 Gene3D - 18 222 IPR038156 -
Lan19g0516 502 Pfam Phytochelatin synthase 11 215 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lan19g0516 502 Pfam Domain of unknown function (DUF1984) 233 482 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lan19g0516 502 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 3 223 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lan19g0516 502 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 5 494 IPR040409 GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0516 Lan-Chr19 7839273 7844216 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0516 K05941 - gmx:547627 827.78