Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0515 ATGGCAAGCCCAAGTTTATACCGCAGAACTCTACCTTCTCCTCCTGCCATTGAGTTCAGTTCCCATGAAGGAAAGATATTTGGTGAAGCTCTTTCTCAAGGCACTATGGAAGGGTTCTTTAAGTTAATATCATACTATCAGACCCAATCAGAGCCTGCTTATTGTGGACTTGCCACAGTTGCTCTTGTTCTTAATGCTCTTTCCATTGATCCTGGTAGGAAATGGAAAGGCCCTTGGAGATGGTTTGATGATTCAATGTTGGATTGTTGTGAGCCTCTGGACATAATCAAAGAAAAAGGCATCACATTTGGAAAAGTTGCATGCTTGGCTCAATGCAATGGTGCTAAAGTTGGTGCTTTTCGGTCGAATGAAAGCACAATCGATAATTTTCGTAAGCATGTCATTTCGTGTTCTTCTTCTGAGGATTGTCATGTGATTGTATCTTACCACAGGGGAACCTTCAATCAGACTGGAACAGGCCATTTTTCACCAATCGGAGGATATCATGCTGAGAGGGATATGGTCCTCATATTGGACGTTGCTCGATTCAAATATCCTCCTCACTGGGTTCCGCTTACGCTTCTCTGGAATGCCATGAGTACCATTGATGAAGCAACTGGACATCACAGAGGGTACATGATTATTTCAAGGCTCGATAGGACACTATCAATATTATATACTTTGAGTTGTAGGCATGAAGGTTGGAGCAGTGTTGCCAGATTCTTATCAGAAGATGTCCCTCTACTTCTGAAGTTTGAGGATTTAAAAGACATTCACGAAGTGCTGTCTTCTGTATTTAAATCTCCTCCTGATGAATTAAGAGGGTTCATCACGTGGGTTGCTGAAGTTCGCCGGAAAGAAGACGGTAATCTCACATTGAGTGAGAAGGAGATAGGAAGGCTAGCTATCAAGGCAGACATACTGGAACAGATTCGGAAAACTGCACTCTTCAGACATGTGACAAGGTGGTTGGATTCGGAATATTCATGCTGCAATGCTAATGCAAACATTGCTGACAAAGATATGTTACCAGAACTTGCTGAAAGTGTTTGTTGCCAAGGGGCAGATCTTTTGACTGGTCGTGGTAGGCTAGGTGTGTCAGCTGTAAAATGCTGTAGTCAAATAGAAATAAAACATCTGAATGCCGATGGTAAAAATCCAGTATCATTGGTTTCCGGAATGGTTACACATGGTGGCAATAGTGAACAAGAAGTTGATGTGTTGGTCCCTTTGTGTCGAAGGGATCCGAGTAGTTTGTGTCATTCAAGTGAAGGTCCCTGCATTGGAATGCATCCATCTAGAGCTGATGCCTTAACAGTGCTTTTATTGGCCTTGCCATTCCATACATGGTCAGGCATTAAAGAAGAAAAGCTGCAGGTTGAAGTTATAAGCCTTCTAGAAACTGAAAATCTCCCGCCCTTACTTCAAGATGAGGTTTGGTTCTTGAGAGAGCAACTCAACTTTCTCATGACTGATATTGGTGCTCCTTCTTCATTATGA 1500 0.4247 MASPSLYRRTLPSPPAIEFSSHEGKIFGEALSQGTMEGFFKLISYYQTQSEPAYCGLATVALVLNALSIDPGRKWKGPWRWFDDSMLDCCEPLDIIKEKGITFGKVACLAQCNGAKVGAFRSNESTIDNFRKHVISCSSSEDCHVIVSYHRGTFNQTGTGHFSPIGGYHAERDMVLILDVARFKYPPHWVPLTLLWNAMSTIDEATGHHRGYMIISRLDRTLSILYTLSCRHEGWSSVARFLSEDVPLLLKFEDLKDIHEVLSSVFKSPPDELRGFITWVAEVRRKEDGNLTLSEKEIGRLAIKADILEQIRKTALFRHVTRWLDSEYSCCNANANIADKDMLPELAESVCCQGADLLTGRGRLGVSAVKCCSQIEIKHLNADGKNPVSLVSGMVTHGGNSEQEVDVLVPLCRRDPSSLCHSSEGPCIGMHPSRADALTVLLLALPFHTWSGIKEEKLQVEVISLLETENLPPLLQDEVWFLREQLNFLMTDIGAPSSL* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0515 499 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 220 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lan19g0515 499 Gene3D - 16 220 IPR038156 -
Lan19g0515 499 Pfam Phytochelatin synthase 7 212 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lan19g0515 499 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 6 493 IPR040409 GO:0016756|GO:0046872|GO:0046938
Lan19g0515 499 SUPERFAMILY Cysteine proteinases 13 216 IPR038765 -
Lan19g0515 499 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 6 493 - -
Lan19g0515 499 Pfam Domain of unknown function (DUF1984) 230 486 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0515 Lan-Chr19 7830892 7835298 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0515 K05941 - gmx:100782042 809.29