Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0514 ATGGCAAGCCCAAGTTTATACCGCAGAACTCTACCTTCTCCTCCTGCCATTGAGTTCAGTTCCCATGAAGGAAAGAAGATATTTGGTGAATCTCTTGCTCAAGGCACTATGGAAGGGTTCTTTAAGTTAATATCATACTATCAAACCCAATCAGAGCCTGCTTATTGTGGACTTGCCACAGTTGCTGTTGTTCTTAATGCCCTTTCCATTGATCCTGGTAGGAAATGGAAAGGCCCTTGGAGGTGGTTTGATGATTCAATGTTGGATTGTTGTGAGCCTCTGGACGTAATTAAAGAAAAAGGCATCACATTTGGAAAAGTTGCCTGCTTGGCTCAATGCAATGGTGCTAAAGTTGGTGCTTTTCGGTCAAATGAAAGCACAATTGATAATTTTCGTAAGCAAGTCATTTCATGTTCTTCTTCTGAGGACTGTCATGTGATTGTATCTTACCACAGGGGAACCTTCAATCAGACTGGAACAGGCCATTTTTCACCAATCGGAGGATATCATGCTGAGAGGGATATGGTCCTCATATTGGACGTTGCTCGATTCAAATATCCTCCTCACTGGGTTCCGCTTACGCTTCTCTGGAATGCCATGAGTACCATTGATGAAGCAACTGGACATCACAGAGGGTACATGATTATTTCAAAGCTCGGCAGGACACCATCAATATTATATACTATGAGTTGTAGGCATGAAGGTTGGAGCAGTGTTGCCAGATTCTTATCTGAAGATGTCCCTCTACTTCTGAAGTTTGAGGATTTAAAAGACATTCAGGAAGTGTTGTCTTCTGTATTTAAATCTCCTCCTGATGAATTGAGAGGGTTCATCACATGGGTTGCTGAAGTTCGCCGGAAAGAAGATGGTAATCTCACATTGAGTGAGGAGGAGATAGGAAGGCTAGCTATCAAGGCAGACATACTGGAACAGATTCGGAAAACTGCACTCTTCAGACATGTGACAAGGTGGTTGGATTCGGAATATTCATGCTGCAATGCTAATGCAAACATTGCTGACAAAGATATGTTACCAGAACTTGCTGAAAGTGTTTGTTGCCAAGGGGCAGATCTTTTGACTGGTCGTGGTAGGCTAGGTGTGTCAGCTGCAAAATGCTGTAGTCGAATAGAAATAAAACATCTGAATGCCGATAGTGAAAATCCAGTAACATTGGTTTCTGGAATGGTTACACATGGTGGCAGTAGTGAACAAGGAGTTGATGTGTTGGTCCCTTTGTGTCGAAGGGATCCGAGTAGTTTGTGTCTTTCAAGTGAAGGTCGCTGCATCGGAATGCATCCATCTACAGCTGATGCCTTAACAGTGCTTTTATTGGCCTTGCCCTTGCATACATGGTCAGGCATTAAAGAAGAAAAGCTGTGGGTTGAAGTTACAAGCCTTCTAGAAACTGAAAATCTCCCACCCTTACTTCAAGATGAGGTTTGGTTCTTGAGAGAGCAACTCAACTTTCTCATGACTGATATTGGTGCTCCTTCTTCATTATGA 1503 0.4285 MASPSLYRRTLPSPPAIEFSSHEGKKIFGESLAQGTMEGFFKLISYYQTQSEPAYCGLATVAVVLNALSIDPGRKWKGPWRWFDDSMLDCCEPLDVIKEKGITFGKVACLAQCNGAKVGAFRSNESTIDNFRKQVISCSSSEDCHVIVSYHRGTFNQTGTGHFSPIGGYHAERDMVLILDVARFKYPPHWVPLTLLWNAMSTIDEATGHHRGYMIISKLGRTPSILYTMSCRHEGWSSVARFLSEDVPLLLKFEDLKDIQEVLSSVFKSPPDELRGFITWVAEVRRKEDGNLTLSEEEIGRLAIKADILEQIRKTALFRHVTRWLDSEYSCCNANANIADKDMLPELAESVCCQGADLLTGRGRLGVSAAKCCSRIEIKHLNADSENPVTLVSGMVTHGGSSEQGVDVLVPLCRRDPSSLCLSSEGRCIGMHPSTADALTVLLLALPLHTWSGIKEEKLWVEVTSLLETENLPPLLQDEVWFLREQLNFLMTDIGAPSSL* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0514 500 Gene3D - 16 220 IPR038156 -
Lan19g0514 500 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 6 494 IPR040409 GO:0016756|GO:0046872|GO:0046938
Lan19g0514 500 SUPERFAMILY Cysteine proteinases 13 217 IPR038765 -
Lan19g0514 500 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lan19g0514 500 Pfam Phytochelatin synthase 7 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lan19g0514 500 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 6 494 - -
Lan19g0514 500 Pfam Domain of unknown function (DUF1984) 231 487 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0514 Lan-Chr19 7798923 7803291 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0514 K05941 - gmx:100782042 823.542