Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0500 ATGATGCTAGTGAGAAGCTCTTCAACACCAATTCTTGGTTCACTCCTATCATCATTCAATGACACTCCTAGTAACAACATTCATCACTCTGAAGCTTCACATGCACTCAAGCATCTACCACCAACTTGTGTTCCTCAACATCAACACCATAAACTTTCTGTTCATCAAAGTCTCTCCACATTCTCATGCAGTTCTTCTCCAATCTCTCCCTCAAATGGTGACTTTGAAAGGAAAAATAAAGGCTTTAGAAGAGCTCAATCTGAAGGGAACTTGGAAGAACTAGCCTTTTCTTCCTTCAACAACAAGGAAGATAGATCAAGTTATCTACACACTCCTACAAGATTTTCAGCTAGGCACAAGCACTTGCCACTTGAGACTATTCCATATTTCTCTGTTTCGAGTCGTAAAGGCGTGCACGAAGAGGAGGAAGATGAAGAAGTGGAAAGTGATTTTGAAGATGAGGAGGAAGAGATGAGAGCAATTGAAGGAAGAGTTATTGGCAGTGGCACTGGTATGTTACTGAGTGAAGAAGTGAGAGTGAAGGGTGGAATTCGCGGTTCGAGTTTCGATGAGGTTGGTGGTAAAGAAATGTATCTTGCAAGGGGACTTGGTATTGATGTCTATGGTGATGGCATAGGTGGCCACAGAGGTGGTGGTTGTGGAGGCGGCGGAAGTGGTGGTGGTGATTATAATTCCATTAGTTCTGGAGGGAATGATGGAAATAGGCAGGGAGTGGAAGAATATTACAAGAAAATGGTGGAGGAAAATCCTGGTAACCCATTGTTTCTGAGGAATTATGCACAGTTTCTGTATCAGCACAAAGAAGATCTTGAAGGGGCTGAGGAGTATTATTCCCGTGCCATATTAGCCGATGCAAAAGATGGAGAAGTTCTATCACAGTATGGGAAGCTAGTTTGGGAGCTACATCAAGACCAAGAAAGAGCCTCAAGCTATTTTGAAAGAGCAGTTCAAGCCTCTCCTGAAGACAGCCATGTACATGCAGCATATGCTAGCTTCCTTTGGGACACAGAGGAAAGTGAGGACAGTTGCGATATGTCACAATGTTTACCACCACGATTTCATCACGGAGCTCTGGCTACAGCAAGCGCTTAA 1113 0.4358 MMLVRSSSTPILGSLLSSFNDTPSNNIHHSEASHALKHLPPTCVPQHQHHKLSVHQSLSTFSCSSSPISPSNGDFERKNKGFRRAQSEGNLEELAFSSFNNKEDRSSYLHTPTRFSARHKHLPLETIPYFSVSSRKGVHEEEEDEEVESDFEDEEEEMRAIEGRVIGSGTGMLLSEEVRVKGGIRGSSFDEVGGKEMYLARGLGIDVYGDGIGGHRGGGCGGGGSGGGDYNSISSGGNDGNRQGVEEYYKKMVEENPGNPLFLRNYAQFLYQHKEDLEGAEEYYSRAILADAKDGEVLSQYGKLVWELHQDQERASSYFERAVQASPEDSHVHAAYASFLWDTEESEDSCDMSQCLPPRFHHGALATASA* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0500 370 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 2 353 - -
Lan19g0500 370 MobiDBLite consensus disorder prediction 135 155 - -
Lan19g0500 370 SMART hat_new_1 310 342 IPR003107 GO:0006396
Lan19g0500 370 SMART hat_new_1 275 307 IPR003107 GO:0006396
Lan19g0500 370 SMART hat_new_1 240 272 IPR003107 GO:0006396
Lan19g0500 370 Coils Coil 144 164 - -
Lan19g0500 370 PANTHER OSJNBA0004N05.2 PROTEIN 2 353 - -
Lan19g0500 370 Gene3D Tetratricopeptide repeat domain 236 352 IPR011990 GO:0005515
Lan19g0500 370 SUPERFAMILY TPR-like 241 350 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0500 Lan-Chr19 7397094 7399069 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0500 - - gmx:100812713 404.831