Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0486 ATGACAGAAATTTCATGGCCTCGTGATCAAGCATCTTCGAATTCCTATAATTCTAACAGCAGTGGTAGCAATGTTTTTAGTTTGCTAGCGCGGAGAGAGATTTCTCCCCGAACAAAACATGTAGCAAAAAGGCAATGGGGAGAAGCTTCTAAATCGAAATCTGGATCTTACTCTCGTCCTAAAAAAGAAGTATCGAGAGATGCAAGACGTGGCCTCCAATCATGGGTTGAGGCCGAGTCATTGCGACATTTGTCAGCTAAGTATTGCCCTTTGTTGCCTCCCCCGCGGTCTACTATTGCAGCAGCATTTAGTCCCGATGGAAAAGTTCTTGCATCAACACATGGTGACCACACTGTAAAGATAATTGACTGTGAAACTGGAAGTTGCTTAAAGGTGTTGGTTGGCCATAAGAGGACACCTTGGGTGGTTAGGTTCCATCCGCTGCATCCACAAATACTTGCTAGTGGGAGCTTAGATCAAGAAGTTCGTTTATGGGATGCTAACACATCAGAGTGCATAATATCTCATCACTTCTATCGTCCCATTGCGTCCATTGCTTTTCATGCCAAGGGGGAAATAATCGCTGTCGCATCAGGCCACAAGCTGTACATATGGCACTACAACAAGAAAGGCGAAGCATCCACACCGGTATTTGTGTTGAAGGCAAGGCGCTCACTTCGGGCTGTGCATTTTCACCCACATGCCGCACCATATCTTTTAACTGCTGAGGTCAATGATCTTGACTCTTCAGATTCGTCAATGACAGAGGCAACATCTATTGGTTATTTACAATACCCTCCACCTGCTGTTTTTGTTACAAATATTCATCCTAGGGAACATAGTAGTTTATCCAGTGAACTACCCTATGTGTCATTGCCTTTCGTCATCATGCCTTCGTATACTGTGGACGAGTCAAGAGAATCACAGCATGTTAGTCATGATGCGTTGGGTTCAGGTAGCATGCAAATTGAATCTTCTGCCACAGTGCAGTTTCAAGCGGACACAAACACAGCAGAGCAATATGGTACAACAGTGTCTCCGATGGATACATTCTCCGAAGTGCCCACTAGCTCTCAAAACGGTACAGAGTATCCTGCTCATACTGCTTTCTCTAATGGAGTGGGAATTGGCATCAGTAATCCTACAATGAATGGTATGGAGACGGATGAAACTGAACCAGCTGAAGGAACACAACATGGAAACTCTACTAATGCTCATTCTCTTAATGGTATGCTAAATGGAGTATCTAGGCAAACCACCAATCGCGATGTTCCCTCAGAGATTGGTCAATTTCGTCAGTTTTACCCTTCAAGAGATCCAAGTGGATGGGAGTTACCTTTTCTGCAGGGATGGTTAATGGGTCAAAGCCAAGTTGGTGTTCCTTCAATGCTTCCTCCCGTGGATGCTAATCGCGACAATGTAACTCAACAGGTAGGTTTGGCCAATCCTAATGTTGATGTAGCAATGCCTGGTAGCATCAGCATACCTGGATCTTCTGTGAGATCAGGTTTACGGAATCATTACTCGCAATCCCGAATACTGGTATCCGGGTCTGGCAATCTTGCTGCTTCTGTTAATAACTCACATGATGGGTCTGATATCCAAACCTATATCAGTCATATCCAGTCGGAACATGCGACATCAATGGCTGCAGCTGCGGCCGCAGAGTTGCCTTGCACTGTGAAGTTAAGAGTATGGTCGCATGACATAAAAAATCCATGTGCCTCGCTAAATGCTGACAAATGTCGTCTAACCATACCACATGCTGTCCTCTGCAGTGAAATGGGTGCCCATTTTTCACCATGTGGTAGACTTTTAGCTGCCTGTGTTGCGTGCATGCTTCCTCACACAGAAGGTGATCCAAGATTACAAACTCCAGTACACCGAGAGCCTGGCATTGCAACTTCACCAACTCGACATCCAATCTCGGCACACCAAGTCATGTATGAGCTGCGGATATATTCTCTTGAGGAGGCAACATTTGGTTCGGTGCTTGCTTCACGGGCAATTAGAGCAGCTCATTGTTTGACTTCAATTCAGTTTTCACCTACATCCGAACACATATTACTTGCCTATGGTCGGCGTCATGGTTCTTTACTTAAAAGCATCGTCATTGATGGAGAAGCAACGTTACCTATATACACAGTGTTAGAGGTATACAGAGTGTCGGATATGGAACTTGTTAGGGTGCTTCCTAGTGCAGAAGATGAGGTCAATGTGGCATGCTTTCACCCTTTTGCTGGTGGAGGGCTAGTTTATGGAACGAAAGAAGGAAAGCTTAGAGTCCTCCAGTATGATGGTGCACAAGCTGTGAGCGGCACCGGACCAAGTTACTTTCCCGAAGATAGCATCATAGGAATCAGTCAGTGA 2370 0.4527 MTEISWPRDQASSNSYNSNSSGSNVFSLLARREISPRTKHVAKRQWGEASKSKSGSYSRPKKEVSRDARRGLQSWVEAESLRHLSAKYCPLLPPPRSTIAAAFSPDGKVLASTHGDHTVKIIDCETGSCLKVLVGHKRTPWVVRFHPLHPQILASGSLDQEVRLWDANTSECIISHHFYRPIASIAFHAKGEIIAVASGHKLYIWHYNKKGEASTPVFVLKARRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTEATSIGYLQYPPPAVFVTNIHPREHSSLSSELPYVSLPFVIMPSYTVDESRESQHVSHDALGSGSMQIESSATVQFQADTNTAEQYGTTVSPMDTFSEVPTSSQNGTEYPAHTAFSNGVGIGISNPTMNGMETDETEPAEGTQHGNSTNAHSLNGMLNGVSRQTTNRDVPSEIGQFRQFYPSRDPSGWELPFLQGWLMGQSQVGVPSMLPPVDANRDNVTQQVGLANPNVDVAMPGSISIPGSSVRSGLRNHYSQSRILVSGSGNLAASVNNSHDGSDIQTYISHIQSEHATSMAAAAAAELPCTVKLRVWSHDIKNPCASLNADKCRLTIPHAVLCSEMGAHFSPCGRLLAACVACMLPHTEGDPRLQTPVHREPGIATSPTRHPISAHQVMYELRIYSLEEATFGSVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGEATLPIYTVLEVYRVSDMELVRVLPSAEDEVNVACFHPFAGGGLVYGTKEGKLRVLQYDGAQAVSGTGPSYFPEDSIIGISQ* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0486 789 MobiDBLite consensus disorder prediction 387 421 - -
Lan19g0486 789 ProSiteProfiles Trp-Asp (WD) repeats profile. 133 175 IPR001680 GO:0005515
Lan19g0486 789 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 1 788 - -
Lan19g0486 789 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 133 171 - -
Lan19g0486 789 MobiDBLite consensus disorder prediction 36 69 - -
Lan19g0486 789 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 97 766 IPR011047 -
Lan19g0486 789 MobiDBLite consensus disorder prediction 1 23 - -
Lan19g0486 789 Pfam WD domain, G-beta repeat 100 123 IPR001680 GO:0005515
Lan19g0486 789 Pfam WD domain, G-beta repeat 127 166 IPR001680 GO:0005515
Lan19g0486 789 Gene3D - 80 254 IPR015943 GO:0005515
Lan19g0486 789 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 1 788 - -
Lan19g0486 789 MobiDBLite consensus disorder prediction 55 69 - -
Lan19g0486 789 MobiDBLite consensus disorder prediction 395 421 - -
Lan19g0486 789 SMART WD40_4 85 123 IPR001680 GO:0005515
Lan19g0486 789 SMART WD40_4 169 206 IPR001680 GO:0005515
Lan19g0486 789 SMART WD40_4 126 166 IPR001680 GO:0005515
Lan19g0486 789 SMART WD40_4 724 764 IPR001680 GO:0005515
Lan19g0486 789 ProSitePatterns Trp-Asp (WD) repeats signature. 153 167 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0486 Lan-Chr19 7149306 7173553 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0486 100 267 Miscellaneous Gene Families AT5G08390 24.862 1.57e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0486 - K17985 gmx:100817857 1328.54