Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0432 ATGGCAAAGCAATTTTATTTCCATAACATGCTCATTATGATAATCTTGTTCCAAACAATTTCTGCTCAATTAGCTCCAGCACCAGCAGGACCAACCAACATCACACAAGTCCTAGAGAAAGCAGGCCAATTCACAACCTTCATCAAGCTTCTCAAAGCATCACAAGTAGATGACAGAATCAATGCACAACTCAACAACTCAAACCAAGGCCTAACCATTTTTGCACCAACTGATAATGCTTTCTCAAGCCTCAAACCAGGGACACTAAACTCCATCACCACACAAGAACAAGTTCAGCTGATACAGTTCCATATACTTCCTACTCTTTATAGCATCTCACAGTTTCAAACTGCTAGTAACCCCTTGCACACTCAAGCTGGGAGTAGTGATGATGGAGAGTACCCTTTGAATGTTACAACCTCAGGGAACCAAGTGAATATAACAACTGGTGTAGTGGACACAACTGTGTCCAATACTATATATAGTGATAGCCAGCTTGCTGTGTATCAGGTTGATAAGGTGCTTCTTCCTTTGGCACTTTTCAGTGCACCACCTACAGCTGCGCCGGCTGAGGCTCCTGCGCCAACCAAGCCGAAGAAGAATGTTCAGGCGTCTGATGCGCCGTCGGGGTCAGATACTTCGGTTGATGCTAGCAGTGCTGTGGAACTTAATAGCCTCACAATGAAAAGTGTCACCTTTATTGTTGCAATTGTTGTTGTTGTTGTCATGACTGTTTAA 738 0.4363 MAKQFYFHNMLIMIILFQTISAQLAPAPAGPTNITQVLEKAGQFTTFIKLLKASQVDDRINAQLNNSNQGLTIFAPTDNAFSSLKPGTLNSITTQEQVQLIQFHILPTLYSISQFQTASNPLHTQAGSSDDGEYPLNVTTSGNQVNITTGVVDTTVSNTIYSDSQLAVYQVDKVLLPLALFSAPPTAAPAEAPAPTKPKKNVQASDAPSGSDTSVDASSAVELNSLTMKSVTFIVAIVVVVVMTV* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0432 245 Pfam Fasciclin domain 43 177 IPR000782 -
Lan19g0432 245 SMART fasc_3 72 178 IPR000782 -
Lan19g0432 245 MobiDBLite consensus disorder prediction 187 215 - -
Lan19g0432 245 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 242 IPR045003 -
Lan19g0432 245 ProSiteProfiles FAS1/BIgH3 domain profile. 31 175 IPR000782 -
Lan19g0432 245 SUPERFAMILY FAS1 domain 30 177 IPR036378 -
Lan19g0432 245 Gene3D FAS1 domain 17 177 IPR036378 -
Lan19g0432 245 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 1 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0432 Lan-Chr19 5950698 5951704 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0432 - - gmx:100782044 348.977