Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0414 ATGTTGCGTTGTTTCGTCCCCGTCTTGTTCTTGCTCTTAGCCACCGTGCTGATGCCGGAGATGACGGCGGTGCACGGTGGTTTTTCGTGGAGTTATGTTCCTCTAGAACGAGTTATTCCTCTGAACCAAAGGGTGGAACTTGAAGCATTGAGAGCTCGAGATAGAGCAAGGCACACTCGAATCTTGGTTGATGTTGTCGATTTCTCTGTTCAAGGAACCTCTGATCCTTACTTCGTTGGGCTGTATTTTACTAAAGTGAAGATGGGTTCTCCTCCAAGAGAATTTAACGTTCAGATTGATACCGGGAGTGACATCTTGTGGGTTAATGGCGAAACTTGCAGTAATTGTCCACAGTCTAGTGGGCTAGGGATTGAGCTCAATTATTTTGACACAGCCAGTTCATCCACTGCTGCGCTGCTTTCCTGCTCAGACCCAATATGCGCTTATGCAGTTCAAACTGCGACTACTGGATGCCCCTCTCAGGATAGTCAGTGCAGATATACCTTTCAGTATGGAGACGGAAGTGGGACATCTGGTTATTATGTTTCTGATTTGATGTATTTTGAGACGGTCGTAGGACACTCTATGCTATCGAATAGTTCAGCTACCATCATTTTCGGGTGTAGCACCTATCAGTCTGGAGATTTAACTAAGACAGAAAAGGCAGTTGATGGAATTTTTGGGTTTGGCCGTGGTGCTTTATCTGTTATATCACAGTTGTCATCACGAGGCATAACGCCCAAAGTGTTCTCTCATTGCTTAAAAGGCGAGGGCAATGGAGGAGGCATACTAGTTCTTGGTGAGATTTTGGAGCCAAATATAGTTTATAGTCCGCTTGTTCCATCACAGGTTCATTACAACTTAAATCTCGAGAGCGTTGCTGTCAATGGACAACTCCTCTCAATTGATCCAGCTGTATTTGCAACAGCTGACAACCAAGGAACTATAGTCGACACTGGTACAACATTGACATACCTTGTTCAAGATGCTTATGATCCTTTTGTCAATGCAATAACTACTGCCGTGTCACAGTTTTCTAAACCCATTATTTCAAAAGGAAACCAGTGCTATCTAGTCGCAACCAGCCTTGGTGATATATTTCCTTCAGTCAGTTTAAACTTTATGGGAGGAGCATCCATGGTTTTAAAACCAGAACAGTACCTTATGCATTATGGTTTCCTTGATAGTGCTGCAATGTGGTGCATTGGCTTCCAGAAAGTGCAGCAGGGATTCACAATTTTAGGAGATCTTGTCCTAAAAGATAGGATTGTTGTATATGACTTGGCTAATCAACAAATCGGATGGGCCGACTATGATTGTTCATCGTCTGTAAACGTCTCTCTGGTTACAAGCAAGAGCAAGGATGAGTACACCGATCCAGGACAGTTGAGTATCAGCTGCTCCAAAATAGGCATTCTAGCCAAGTTGCTACCTGTAACCATTGTGGCTTTTCTTGTGCACATAATAGTTTTCATGGAATCCCAATTTTTGTAA 1494 0.4337 MLRCFVPVLFLLLATVLMPEMTAVHGGFSWSYVPLERVIPLNQRVELEALRARDRARHTRILVDVVDFSVQGTSDPYFVGLYFTKVKMGSPPREFNVQIDTGSDILWVNGETCSNCPQSSGLGIELNYFDTASSSTAALLSCSDPICAYAVQTATTGCPSQDSQCRYTFQYGDGSGTSGYYVSDLMYFETVVGHSMLSNSSATIIFGCSTYQSGDLTKTEKAVDGIFGFGRGALSVISQLSSRGITPKVFSHCLKGEGNGGGILVLGEILEPNIVYSPLVPSQVHYNLNLESVAVNGQLLSIDPAVFATADNQGTIVDTGTTLTYLVQDAYDPFVNAITTAVSQFSKPIISKGNQCYLVATSLGDIFPSVSLNFMGGASMVLKPEQYLMHYGFLDSAAMWCIGFQKVQQGFTILGDLVLKDRIVVYDLANQQIGWADYDCSSSVNVSLVTSKSKDEYTDPGQLSISCSKIGILAKLLPVTIVAFLVHIIVFMESQFL* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0414 497 SUPERFAMILY Acid proteases 77 444 IPR021109 -
Lan19g0414 497 Gene3D Acid Proteases 64 268 IPR021109 -
Lan19g0414 497 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 7 459 - -
Lan19g0414 497 Pfam Xylanase inhibitor N-terminal 82 267 IPR032861 -
Lan19g0414 497 Gene3D Acid Proteases 269 447 IPR021109 -
Lan19g0414 497 PRINTS Pepsin (A1) aspartic protease family signature 88 108 IPR001461 GO:0004190|GO:0006508
Lan19g0414 497 PRINTS Pepsin (A1) aspartic protease family signature 315 326 IPR001461 GO:0004190|GO:0006508
Lan19g0414 497 PRINTS Pepsin (A1) aspartic protease family signature 412 427 IPR001461 GO:0004190|GO:0006508
Lan19g0414 497 CDD pepsin_A_like_plant 82 440 IPR034161 -
Lan19g0414 497 PANTHER ASPARTYL PROTEASES 7 459 IPR001461 GO:0004190|GO:0006508
Lan19g0414 497 Pfam Xylanase inhibitor C-terminal 285 436 IPR032799 -
Lan19g0414 497 ProSiteProfiles Peptidase family A1 domain profile. 82 436 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0414 Lan-Chr19 5414026 5419254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0414 66 442 Miscellaneous Gene Families AT1G44130 28.788 3.10e-43 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0414 - - gmx:100804140 751.125