Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0396 ATGGCATCATTATCTTCATATAATGATTTAGAACGTTCAAGAAGCCGTGGCTTGAGCTTTGAAGAAGTGTGGAATAGTGGTGCACCTGATGTATTCAATGTGAGTCGTCACTCACAAAATGATGCTGAAGAAAATCTCATGTGGGCTGCCATAGAAAGATTACCAACTTATGATCGCATGAGAAAAGGAGTGTTGAAACAAATGCATGATGATGGAAATATTGTGCATAACGAAATTGATATTGTTAACCTAAAGTTTCAAGATAAGAAGGTTATAATGGATAAGATACTACACTTGGTGGAGCAAGATAATGAGAAGTTTCTAAGCAAACTAAGAGATCGAATTGACAGGGTGGGGATTACACTTCCTAAAATTGAAGTCCGGTATGAAGATTTATATGTGGAAGGAGATGTGCATGTTGGGGGTAGAGCACTTCCTACATTGTTGAATGTTTTGCTGAACATTCTTGAGGTTATTGCTGGAGTGCTTCATCTTATAAAATCTAAGAAGAAAGAAATTCAGATTCTTAAAAATGTCAGTGGAATCGTCAAACCATCAAGGATCACTTTACTTTTGGGTCCACCAGCCTCAGGGAAAAGTACATTACTTCTGGCACTGGCAGGGAAACTTGACAAGGATTTAAGGACTTCTGGGAAAATCACATACTGTGGGCATGAGCTAAATGAATTTGTTCCTCAAAAAACTTCGGCCTATATTAGTCAACAAGACTTGCACATTGGACAAATGACAGTGAAAGAAACCTTAGATTTTTCAGGAAGATGTCTTGGTGTTGGAAGTAGATATGACATGTTGGCTGAACTTACAAGAAGAGAAAAACAAGAAGGAATTAAGCCAGACCCTGAAATTGATGCATTCATGAAGGCTTTAGCAATGTCAGGCCAAGAAACTAGTTTATCTACTGATTATATTCTCAAGATACTTGGATTGGATATTTGTGCGGACATTATGGTTGGCGATAACATGAATAGGGGTATCTCTGGTGGACAAAAGAAGCGTGTGACAACAGGGGAGATGTTGGTTGGACCAGCAAAGGCACTCTTTATGGATGAAATATCAACAGGATTGGACAGCTCCACCACATTTCAGATATGCAAGGTCATGAGACAAATGGTTCATATTATGGATATAACCATGGTGATTTCTCTTCTGCAGCCAGCTCCAGAGACATATGAACTCTTTGATGACATTATCCTACTTTCGGAAGGTCAAACTGTATACCAAGGTCCGCGCGAGAATGTGCTAGAGTTTTTCGAACACATGGGTTTCAAATGTCCCGCGAGAAAAGGAGTTGCTGATTTTTTGCAAGAAGTAACATCTAAGAAAGACCAGCAACAATACTGGAATAGGGAAAATGAACCATACAGATATGTTACAGTTCCTGAATTTGTAAATGCCTTCAGTTCTTTTAAAATAGGAGAACAAATTAGGAATGAGTTAAAGGTTCCCTATGAGAAGGAACAAACCCACCCTGCTGCCTTAGTGAAAGACAAGTATGGTATATCAAATCGGGAACTACTGCAGGCATGCTTTACAAGAGAAGTGTTGCTTATGAAGCGCGGCTCATTTGTCTACATATTCAAGACTATACAGATAACAATCATGTCTATTGTAGCCCTCACCGTCTTCCTTAGAACTCAAAATCATCCCGGAACTTTTGATGGTGGACAGAAATACATGGGAGGACTATTTTTCGCTGTAACAAATTTGATGTTTAATGGCATGTCCGAACAAGCCACGATTATTCAAAGGCTTCCTATCTTTTACAAACAAAGGGAATTGTTGTTTTTCCCTCCATGGGCATTTGCGCTACCTATATGGGTTCTCAGGATCCCTCTCTCCCTAATGGATTCAGGAATATGGATCATCTTTACATACTATACAATTGGATATGCTCCTTCTGCTGGCAGATTCTTCAGACATCTCTTGGTACTATTTTGCATTCATCAGATGGCCGTCTCGCTTTTTCGGTGCATAGCTGCAATTAGTAGAACACAAGTTGTTGCCAATATAATATCTTTCTTAGTCTTTCAAGTAATGTTTGTACTTGGAGGTTTTATTATCTCTAAAGATGCTATTAAGAAATGGCTGATATGGGGATATTATATGTCTCCTATGATGTATGGTCAGAATGCCATAGTAATAAATGAATTTTTAGATGATAGATGGAGTCAGCCAAATACGGATCAGAGAATTCATGCAACTACGATTGGAAAAGCAATTCTCAAATCTAGAGGCTTCTATACACAAGGTTATTGGTATTGGATAGGAATTGGAGCCTTGCTTGGCTTTGCAGTTCTTTTCAACCTTATCTTTATAGTTGCATTGACTTACTTGAGTCCTTTCGGTGATTCAAAATCATCAATCATCACGGATGAAGATGAGGAGAAGAAGAAGAAGAATGAAAAGCCATCTACTAGAAAAAAGGACACTCGAGGGAAATCAGAAATTAATGGTTCTTCTAATCAAGAACCAAGAACAGGAATGACTCTGCCATTTCAACCTCTTTCACTTACATTTAATCATGTCAACTACTATGTAGATATGCCTGCAGAAATGAAAAAGCAAGGAATCCCCGATGATCGACTTCAGCTGCTTAAAGATGTTAGTGGTGCTTTCAGACCAGGTATATTGACAGCACTCATGGGTGTTAGTGGTGCTGGGAAGACAACTCTCATGGATGTATTAGCTGGAAGAAAAACAGGAGGGTACATTGAAGGAAGTATTACCATCTCAGGCTATCCAAAGAATCAAGAAACATTTGCTCGAATTAGCGGTTACTGTGAACAGAATGACATTCATTCTCCAAATGTTACTGTCTATGAATCACTATTATTCTCGGCTTGGCTTCGTCTTTCGGCAGATGTAAATACGCAAGAACGAAAGATGTTTGTCGATGAAGTTATGGAATTATTGGAGCTTAAACCAATCGGAGATACTTTAGTGGGTCTTCCAGGCACAGGTGGTTTGTCAACAGAACAAAGGAAAAGGCTTACTATTGCGGTAGAGTTGGTTGCAAACCCTTCAATCATCTTCATGGATGAACCAACATCTGGCCTTGATGCCAGAGCGGCTGCAATTGTTATGCGAACTGTGAGAAATACTGTGAACACAGGGAGAACCGTTGTCTGCACAATTCACCAGCCAAGCATAGACATTTTTGAAAGTTTTGACGAGTTAGTATTAATGAAAAGAGGAGGTCAAATCAGCTATGCTGGACCTATTGGTCATCAATCACAGAAGCTTATAGAGTACTTCGAAGGTATTGCAGGGGTTGAAAAAATCACAGATGGTTATAATCCTGCTACATGGATGCTTGAAGTTAGCACTCCTTTAATTGAGTCTCAACTTGATGTAGATTTTGCACAGCTCTATACTAACTCTACCCAATACCAGAGGAATCAAGAACTTATCAAAGAGCTAAGTACTCCACCACCAGATTCCAAGGACTTGTTCTTCGAATCGGTTTATGCCCAATCATTTTATGTACAATGGAAAGCTTGTTTCTGGAAACTACATTGGTCCTATTGGAGAAATCCTCAGTATAATTTCACCCGGTACAGTTTGACAATAATTATGGGACTAATATTTGGTGCAGTCTTTTGGAACAAAGGCAAAATGATATCGGAACAACAAGATTTATTGAATATGTTTGGAGGATTGTATGTTGCTGTTGTTTTCCTTGGATTCATGAATGCTTCTGCAGTGCAACCAATTGTCGATATCGAAAGAACTGTTCTATATCGTGAAAAAGCGGCAGGGATGTATTCAGCATTCCCCTATGCAATCAGCCAGGTAGCAATTGAGGGAATTTATATCATAATCCAAACAGTTGTTTACAGTCTTATCCTTTACTCCATGATTGGGTTAAAATGGAGGGCAGATAAATTCTTCTGGTTCTACTACTATATAACGACATGTTTCTTGTACTACACACTGTACGGTATGATGGCTGTCGCATTAACTCCGGGTTACCAAGTTGCGGCAATTTCTATGTCCTTCTTCATGACATTGTGGAACTTGTTTGCCGGCTTTACTATTCCAATGACTCAAATTCCTATATGGTGGAGATGGTTCTATTGGATTTGCCCTGTTCCTTGGACATTCAATGGCATTATTACTTCTCAATATGGTGACTTAGAGTCAGAAATAATAATACCAGGATCTGCAAATATGGGATTCAAGGCTTTCCTTAAAGATAGGTTTGGTTTTCACCATGACTTCCTTCCAGTGATTGCTGTAGTTCATATATCCTGGTCTTTCCTCTTCTTGTTAGGCTTCGCCTTCGGCATCAAATTCTTGAACTTCCAGAAAAGATAG 4338 0.391 MASLSSYNDLERSRSRGLSFEEVWNSGAPDVFNVSRHSQNDAEENLMWAAIERLPTYDRMRKGVLKQMHDDGNIVHNEIDIVNLKFQDKKVIMDKILHLVEQDNEKFLSKLRDRIDRVGITLPKIEVRYEDLYVEGDVHVGGRALPTLLNVLLNILEVIAGVLHLIKSKKKEIQILKNVSGIVKPSRITLLLGPPASGKSTLLLALAGKLDKDLRTSGKITYCGHELNEFVPQKTSAYISQQDLHIGQMTVKETLDFSGRCLGVGSRYDMLAELTRREKQEGIKPDPEIDAFMKALAMSGQETSLSTDYILKILGLDICADIMVGDNMNRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQICKVMRQMVHIMDITMVISLLQPAPETYELFDDIILLSEGQTVYQGPRENVLEFFEHMGFKCPARKGVADFLQEVTSKKDQQQYWNRENEPYRYVTVPEFVNAFSSFKIGEQIRNELKVPYEKEQTHPAALVKDKYGISNRELLQACFTREVLLMKRGSFVYIFKTIQITIMSIVALTVFLRTQNHPGTFDGGQKYMGGLFFAVTNLMFNGMSEQATIIQRLPIFYKQRELLFFPPWAFALPIWVLRIPLSLMDSGIWIIFTYYTIGYAPSAGRFFRHLLVLFCIHQMAVSLFRCIAAISRTQVVANIISFLVFQVMFVLGGFIISKDAIKKWLIWGYYMSPMMYGQNAIVINEFLDDRWSQPNTDQRIHATTIGKAILKSRGFYTQGYWYWIGIGALLGFAVLFNLIFIVALTYLSPFGDSKSSIITDEDEEKKKKNEKPSTRKKDTRGKSEINGSSNQEPRTGMTLPFQPLSLTFNHVNYYVDMPAEMKKQGIPDDRLQLLKDVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGSITISGYPKNQETFARISGYCEQNDIHSPNVTVYESLLFSAWLRLSADVNTQERKMFVDEVMELLELKPIGDTLVGLPGTGGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFESFDELVLMKRGGQISYAGPIGHQSQKLIEYFEGIAGVEKITDGYNPATWMLEVSTPLIESQLDVDFAQLYTNSTQYQRNQELIKELSTPPPDSKDLFFESVYAQSFYVQWKACFWKLHWSYWRNPQYNFTRYSLTIIMGLIFGAVFWNKGKMISEQQDLLNMFGGLYVAVVFLGFMNASAVQPIVDIERTVLYREKAAGMYSAFPYAISQVAIEGIYIIIQTVVYSLILYSMIGLKWRADKFFWFYYYITTCFLYYTLYGMMAVALTPGYQVAAISMSFFMTLWNLFAGFTIPMTQIPIWWRWFYWICPVPWTFNGIITSQYGDLESEIIIPGSANMGFKAFLKDRFGFHHDFLPVIAVVHISWSFLFLLGFAFGIKFLNFQKR* 1446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0396 1445 MobiDBLite consensus disorder prediction 798 835 - -
Lan19g0396 1445 Pfam Plant PDR ABC transporter associated 729 795 IPR013581 -
Lan19g0396 1445 SMART AAA_5 881 1073 IPR003593 -
Lan19g0396 1445 SMART AAA_5 185 411 IPR003593 -
Lan19g0396 1445 CDD ABCG_PDR_domain1 165 415 IPR034001 -
Lan19g0396 1445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 867 1080 IPR027417 -
Lan19g0396 1445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 447 IPR027417 -
Lan19g0396 1445 MobiDBLite consensus disorder prediction 798 821 - -
Lan19g0396 1445 Pfam ABC-2 type transporter 512 724 IPR013525 GO:0016020|GO:0140359
Lan19g0396 1445 Pfam ABC-2 type transporter 1170 1382 IPR013525 GO:0016020|GO:0140359
Lan19g0396 1445 PANTHER ATP-BINDING CASSETTE TRANSPORTER 17 1445 - -
Lan19g0396 1445 CDD ABCG_PDR_domain2 841 1079 IPR034003 -
Lan19g0396 1445 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 160 433 IPR003439 GO:0005524
Lan19g0396 1445 Pfam ABC-transporter N-terminal 100 151 IPR029481 -
Lan19g0396 1445 Pfam ABC-2 type transporter 391 464 IPR043926 GO:0140359
Lan19g0396 1445 Pfam ABC-2 type transporter 1053 1121 IPR043926 GO:0140359
Lan19g0396 1445 Gene3D - 163 465 IPR027417 -
Lan19g0396 1445 Gene3D - 858 1092 IPR027417 -
Lan19g0396 1445 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 844 1096 IPR003439 GO:0005524
Lan19g0396 1445 Pfam ABC transporter 872 1024 IPR003439 GO:0005524
Lan19g0396 1445 Pfam ABC transporter 176 358 IPR003439 GO:0005524
Lan19g0396 1445 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 17 1445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0396 Lan-Chr19 4977049 4985580 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0396 K08711 - gmx:100786482 2112.04