Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0373 ATGACGACGGAACTGTTGCAGTTACCTTCACCTTCAACTCGTTCCTGTGTAGGACACGATGCCCTTATTAACGACACCAACCCTACACAACAACAAGGAGAAGAAGAAGAAGAAGAAGAAGAAAGGGATAATAGAGAAGGAGATCAACTTTCGTTTCTAACCCTATTTATTGATACGTTTAAGAAATCTGTAATTGGTACTTGTACTAACACTGATTTCTCTTCTTCTTCTTCTTCTTCAATGGAAATTGGTTGGCCTTCTAATGTGAGACACGTTGCACATGTTACTTTTCATCGATTCCATGGTTTTCTTGGTTTGCCTCTTGAATTTCAACCACAATTACCACCTACACCTCCTAGCGCAAGTGCGAGTGTTTTCGGGGTTTCAACAGAGTCTATGCAGCTTTCTTTTGATGCCAGAGGGAATAGCATACCTACAATATTGCTGTTAATGCAAAGACGTTTATATACACAAGGAGGTCTGCAGGCTGAAGGAATCTTCCGAATTAATGCTGAAAATGGTCAAGAGGAGTTTGTGAGGGAACAATTAAACAGAGGAGTAGTACCAGATGGCACAGATGTGCACTGTTTGGCAGGTCTTATAAAGGCTTGGTTCAGAGAACTTCCAACTGGGGTATTGGACCCTCTTTCACCGGAGCAGGTGATGCAGTCCCAGTCAGAAGAAGAATGTGCTCAGCTTGTGAGGCTTCTTCCTCCGACTGAAGCTGCTCTGTTAGATTGGGCAATAAACCTGATGGCTGATGTTGCTCAACTTGAACATTTGAATAAAATGAACGTACGCAACGTTGCAATGGTTTTTGCTCCAAACATGACTCACATGGTGGATCCTTTGACTGCTTTGATGTATGCCGTACAAGTCATGAATTTTCTGAAGACTCTTGTTGAAAAGGCGCTGAGAGAAAGAGAAGAATCTATGGGAAAATCAGATCCCATTTCAAACCTAAATTCTTTTGATGACGATGGGCACCATAGCTCTTCAGAATGGATTCTCAAGGATGACAGTGAAAATGAAAATGATAGCAGTGAAGAGGATACATCATTTGTTACTGAAGAACCTTCTCAACAAAGCCCTATTCATGTTATTGAAGACGGCTACGAAACTGAAAGTGGGTCGAAAAGTCTCTCAACTTCTGAAAAACAATTTCCTGGAGAAAATAGGTTGCTGGTGGACAGTTGTCCTTGCAATGTTGTCTCTCAACTTACCAGTAGTCTGGCAAAGGAGAATCAAGCAAATATTTGCAAGAGCAAAAGTCTTCAATTAAGTACCTATAATATGGTCAAGTGTTCCAAAAAGTTGATTGAGCTTTCGATAGCAGGACCTGTGGAGAAAAGCATGGGATCTGCAATTATTGGACGTATAAATTCAAGATCAGAGTTGACCGAAGCATGGCGTTGA 1416 0.4131 MTTELLQLPSPSTRSCVGHDALINDTNPTQQQGEEEEEEEERDNREGDQLSFLTLFIDTFKKSVIGTCTNTDFSSSSSSSMEIGWPSNVRHVAHVTFHRFHGFLGLPLEFQPQLPPTPPSASASVFGVSTESMQLSFDARGNSIPTILLLMQRRLYTQGGLQAEGIFRINAENGQEEFVREQLNRGVVPDGTDVHCLAGLIKAWFRELPTGVLDPLSPEQVMQSQSEEECAQLVRLLPPTEAALLDWAINLMADVAQLEHLNKMNVRNVAMVFAPNMTHMVDPLTALMYAVQVMNFLKTLVEKALREREESMGKSDPISNLNSFDDDGHHSSSEWILKDDSENENDSSEEDTSFVTEEPSQQSPIHVIEDGYETESGSKSLSTSEKQFPGENRLLVDSCPCNVVSQLTSSLAKENQANICKSKSLQLSTYNMVKCSKKLIELSIAGPVEKSMGSAIIGRINSRSELTEAWR* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0373 471 CDD CRIB 81 124 - -
Lan19g0373 471 MobiDBLite consensus disorder prediction 1 30 - -
Lan19g0373 471 MobiDBLite consensus disorder prediction 308 365 - -
Lan19g0373 471 ProSiteProfiles CRIB domain profile. 83 96 IPR000095 -
Lan19g0373 471 Pfam RhoGAP domain 145 279 IPR000198 GO:0007165
Lan19g0373 471 Gene3D Rho GTPase activation protein 117 314 IPR008936 GO:0007165
Lan19g0373 471 MobiDBLite consensus disorder prediction 327 342 - -
Lan19g0373 471 MobiDBLite consensus disorder prediction 1 48 - -
Lan19g0373 471 SUPERFAMILY GTPase activation domain, GAP 123 302 IPR008936 GO:0007165
Lan19g0373 471 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 7 471 - -
Lan19g0373 471 ProSiteProfiles Rho GTPase-activating proteins domain profile. 128 312 IPR000198 GO:0007165
Lan19g0373 471 CDD RhoGAP 145 302 - -
Lan19g0373 471 SMART PBD_5 83 117 IPR000095 -
Lan19g0373 471 SMART RhoGAP_3 142 305 IPR000198 GO:0007165
Lan19g0373 471 PANTHER MKIAA1688 PROTEIN 7 471 IPR044785 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0373 Lan-Chr19 4589346 4592789 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0373 - - aip:107604632 647.506