Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0371 ATGGGCTTCCAAAATTACTTAACCATTTTTTTAGTGCTTTTCTTTTCCCTTAGTGTGATACTAATAAACAATGAAGTTGAAGGGTTTCATGAAATATACCCACATCTTCAATCTGTTTCAGCGATTTCCGTGAACGATCAACACAGAACTGCATACCATTTTCAACCTCCTAGGAATTGGATGAACGATCCAAATGGTCCCATCTATTACAATGGATACTACCATCTCTTTTACCAATATAACCCAAACGGGTCAGTGTGGGGTAACATTGTGTGGGCTCATTCGGTATCAAAGGATCTTGTCAACTGGAAAGCACTTGAGCATGCCATTTACCCGTCCAAAACCTTTGACAAGTTCGGGTGTTGGTCCGGATCGACAACCGTGGTCCCGGGTAAAGGACCAGTGATCCTCTACACCGGAATTGTCGATGATAAAAACACTCAGGTACAATGTTATGCTGAGCCTGAAGATCCATCCGACCCACTCCTCGTAAAATGGAAAAAACCTGACGATATCAACCCGATTGTGATTGCTGACCAAGGAGTGAACGGTAGTGCTTTTCGTGATCCTACAACAGCATGGTGGAGCACGGACGGACAGTGGAGGATGTTGGTTGGTAGTAGAAAGAAGCATAGAGGAATTTCCTATTTGTATAAGAGCAAGGACTTTATAAAGTGGGTTAAGGCAAAACACCCTATTCATTCAAAACCAAAGACTGGTATGTGGGAGTGCCCTGATTTTTTCCCAGTTGCCTTGGAAGGCAAAGAAGGGTTGGACACAGGTATGTTGGGAAATAATGTTAGGCATGTCCTAAAGAATAGCCTTGACATGACCAGGTTTGATTACTATACATTAGGAACATATACTCCTGACATGGATAAATATGTGCCTGACAACACTTCAGAAGATGGTTGGAATGGCCTTAGATATGATTATGGTAACTTTTATGCTTCAAAGTCATTCTTTGATCCTAGCAAGAATAGAAGGATCTTGTGGGGTTGGGCAAATGAGTCTGATTCCAAGGAAGATGATGTTAATAAAGGATGGGCAGGAATTCAGGCAATTCCAAGGACCATTTGGCTTGATCCATCTAAGAGACAATTGGTTTTATGGCCCATTGAAGAATTAAACAATCTTAGGGGGAAAGAAGTTAAGATGAACAATCAAAAACTTAATAAAGGAGATTATGTTGAAGTAAAAGGAATTACTGCACCTCAGGCTGATGTGGAAGCTACCTTTTCATTTTCAAGCTTGGACAAGGCAGAGGCATTTGATCCAAGTTGGGTGAATGCACAGGATCTTTGTGCCCAAAAGGGTTCAAAGCTTCAAGGTGGAGTTGGACCCTTTGGGCTTCTCACTCTGGCTTCACAAGATCTTCAGGAGTTTACTCCTGTATTTTTTAGAATTTTCAAAGCTGCAACCAAGCATGTGGTTCTCATGTGCTCTGATGCAACAAGTTCCTCAATTAAGATCAATTTATACAAACCATCATTTGCTGGTTTTCTAGATGTGGATTTATCCACTGGTAAAATTCCCCTTAGGAGTTTGATCGATCACTCTGTAGTGGAGAGTTTTGGAGCAGGAGGGAAAACAAACATCTTGTCTAGAGTATATCCAGCCCTAGCTATAGGAAATGAAGCTCATTTGTTTGTGTTCAACAATGGCACTGAGCCAATCACAGTGGAGAACCTTCAAGCATGGAGCATGGGAAAAGCTGATATACAATGA 1728 0.4144 MGFQNYLTIFLVLFFSLSVILINNEVEGFHEIYPHLQSVSAISVNDQHRTAYHFQPPRNWMNDPNGPIYYNGYYHLFYQYNPNGSVWGNIVWAHSVSKDLVNWKALEHAIYPSKTFDKFGCWSGSTTVVPGKGPVILYTGIVDDKNTQVQCYAEPEDPSDPLLVKWKKPDDINPIVIADQGVNGSAFRDPTTAWWSTDGQWRMLVGSRKKHRGISYLYKSKDFIKWVKAKHPIHSKPKTGMWECPDFFPVALEGKEGLDTGMLGNNVRHVLKNSLDMTRFDYYTLGTYTPDMDKYVPDNTSEDGWNGLRYDYGNFYASKSFFDPSKNRRILWGWANESDSKEDDVNKGWAGIQAIPRTIWLDPSKRQLVLWPIEELNNLRGKEVKMNNQKLNKGDYVEVKGITAPQADVEATFSFSSLDKAEAFDPSWVNAQDLCAQKGSKLQGGVGPFGLLTLASQDLQEFTPVFFRIFKAATKHVVLMCSDATSSSIKINLYKPSFAGFLDVDLSTGKIPLRSLIDHSVVESFGAGGKTNILSRVYPALAIGNEAHLFVFNNGTEPITVENLQAWSMGKADIQ* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0371 575 SUPERFAMILY Arabinanase/levansucrase/invertase 43 373 IPR023296 -
Lan19g0371 575 SMART glyco_32 53 529 IPR001362 GO:0004553|GO:0005975
Lan19g0371 575 ProSitePatterns Glycosyl hydrolases family 32 active site. 53 66 IPR018053 GO:0004553|GO:0005975
Lan19g0371 575 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 10 575 - -
Lan19g0371 575 SUPERFAMILY Concanavalin A-like lectins/glucanases 372 571 IPR013320 -
Lan19g0371 575 Pfam Glycosyl hydrolases family 32 C terminal 375 568 IPR013189 -
Lan19g0371 575 Gene3D - 386 569 - -
Lan19g0371 575 Gene3D Glycosyl hydrolase domain; family 43 57 385 IPR023296 -
Lan19g0371 575 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE PROTEIN 10 575 - -
Lan19g0371 575 Pfam Glycosyl hydrolases family 32 N-terminal domain 53 372 IPR013148 -
Lan19g0371 575 CDD GH32_Fruct1-like 59 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0371 Lan-Chr19 4558530 4562254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0371 26 571 Glycoside Hydrolase AT2G36190 63.978 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0371 K01193 - gmx:100799008 962.214