Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0361 ATGGGAAATGCACAATCACCTCCCAATAATCCTCAATATGTTTCAGCATCAAGAGCTTTTACTCAAAATGAACTACGAGACTTGAATTCTCTCTTCAATTCTCTCGCAGCTCAATCCCAGAACAATGCCAATTCCATTTCTCTCTCTGTCTTTCAGTCATATTTTAAACTTCATGGCCCTATTGGGGAGAGGATGTTTGATTTGATTACTCAAGAGCGCAAGGATCAAAGTTTAACTTTTGAAGACCTTGTTATTGCTAAAGCTACTTATGAAAAAGGCACAAAAGATGAAATTGAAGAATTCATTTTTCGCTTATTGGATATATCTGGAGACAATTTTGTAGGGAAGTCTGATTTGGAATCTGTTGTGATTTCCATTTTTAACGATATACTATGCATTAAAGATCCTGAAGTTACATCAAGTTCAGACCAGGACATTGTCAACATATTCCTGAGTGCTGCAAATTTCTCTGTGCACGATGAAGGGAGCAATGAGGAGACTCTGTCTTTTGAAGATTTCAGAAGATGGTGTGCTCGTCTTCCATCTGTGAGAAAGCTTCTCGGGAGCTTGCTGATTTCACCTGATTCAGGTCGACCAGGTTTTCGAATTCCTAACCTATTGACCTCAAAGGGTATTGATTCTAACATCATACTTTTGAGAAAGGAATATGCTTGGCATATAGGAGGAGCACTTTCTCAGCATGAGCTGGAAGATTGGAAGCTTCTGTATCATAGTGCTGTTAATGGTCATAGTTTTAATACATTCTTGGGCCACACTTCAAATCATGCAGGCCCAACTGTGTTAATTATTAAGGATAAAGAGGGTAATATATATGGAGGATATGCTTCTCAACCATGGGAGCGGCATGCCGAGTTTTATGGAGACATGAAATCTTACATTTTTCAACTAAATCCAGTGGCATCTATATTCAGGCCTACTGGAGCAAACAATAATCTACAATGGTGTGCTGTCAACTTCACTTCAGAGGAGATTCCAAATGGCATTGGCTTTGGAGGAAGAGTTAATCACTTTGGATTATTTATCTCAGCGAACTTCGATCAAGGGCATACATTCTCATGTTCTACATTCGGCAGTCCTTGCCTCTCGAATACTAGCCGAATATTGCCAGAAGTTATAGAATGCTGGGGAGTGACTCAAGGAGAGGCACAAGGCAAGAATGATGCTGTCAAGGGTACTGTACTGGAGAGGTTCAAGGAAGATAGGAACATGTTAAATTTGGTAGGGTTAGCAAATTCCAGTGAGTGA 1266 0.3989 MGNAQSPPNNPQYVSASRAFTQNELRDLNSLFNSLAAQSQNNANSISLSVFQSYFKLHGPIGERMFDLITQERKDQSLTFEDLVIAKATYEKGTKDEIEEFIFRLLDISGDNFVGKSDLESVVISIFNDILCIKDPEVTSSSDQDIVNIFLSAANFSVHDEGSNEETLSFEDFRRWCARLPSVRKLLGSLLISPDSGRPGFRIPNLLTSKGIDSNIILLRKEYAWHIGGALSQHELEDWKLLYHSAVNGHSFNTFLGHTSNHAGPTVLIIKDKEGNIYGGYASQPWERHAEFYGDMKSYIFQLNPVASIFRPTGANNNLQWCAVNFTSEEIPNGIGFGGRVNHFGLFISANFDQGHTFSCSTFGSPCLSNTSRILPEVIECWGVTQGEAQGKNDAVKGTVLERFKEDRNMLNLVGLANSSE* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0361 421 Pfam TLD 241 384 IPR006571 -
Lan19g0361 421 ProSiteProfiles TLDc domain profile. 217 385 IPR006571 -
Lan19g0361 421 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 413 - -
Lan19g0361 421 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 413 - -
Lan19g0361 421 SUPERFAMILY EF-hand 1 193 IPR011992 -
Lan19g0361 421 SMART 109ultra 218 385 IPR006571 -
Lan19g0361 421 ProSitePatterns EF-hand calcium-binding domain. 107 119 IPR018247 -
Lan19g0361 421 Gene3D - 1 189 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0361 102 420 EF-hand Containing Proteins AT5G06260 61.180 2.37e-149 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0361 - - gmx:100804508 716.072