Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0339 ATGATGGAATCTGAAAATGGGGTTGTTGTGGAGGAAGAGAAACATGTTATTGGGGTAACAACCGAGGATAATATAAAGAAGGAAGTTGAAAACAATTGTAATGTTGCAGAAATTCAGATCAAGAATGAAGAACCTAAACCCAAAGTGGAGACTGAAGTGCCCAATTCTGCTGGTGACACTGCTGCAGTTAAATCATCTTTAACTTCTTCTGCAAGTAAAAAGTCTAAACGTGCCAAGGAACCTGGTCTTAGAGCTGTTGATGCTTCCAAGAACAACAAAAAATCCAAAGATAAACCTATTTTGAAGGGAACAACATCTACATCTCAAAAACAAAGACCAACACTTTCTCAGAGCCTCACCTTCCCAGCCAAATCAACTCGACGAAATGCCATGCACAAAAGCATTGATGATGGGCATAATTCAGTGAAGGCAAAAGTTAAACAAGTTCTAGATAATGGGACTAAAGCTGATGCTTCCATTCTTCATTCAAACAAGTCCATTAACTCAGAAGTGAAATCAAAGGAAGCAAAAGTTGACACTAGAAGTTTTAAACGCTCTGTGTCTGTGTTTGGAAGGTCTACTCCAGTGAATGGAGTCGCCAAGAACCATCCCTCGGAGGCATCGCCAGGTGCTACTACTCAGAGGAACAGTGGTTCTAGATTTTCCTTCAGATTGGAAGAAAGAGCTGAAAAAAGGAAAGAGTTTTTCTCAAAGCTAGAAGAGAAAATTCATGCAATGGAAGCTGAGAAAACTAATATGCAAGAAAAATCAAAGGAAAACCAAGAGGCAGAGATCAAGAAATTAAGGAAGGCTTTGACATTCAAAGCCACTCCAATGCCAAGTTTTTACAAGGAACCACCTAGTAAAGTTGTTCTGAAAAAGATACCAACAACTCGCCCGAAATCCCCAAAGCTTGGAAGAAACAAAGGATCTGCTATGAACAACATTCCAGAAGAAGATAAATCTTGTTCCAGCCCACATGAGAAACAACAGCAGAATGATTCAACCAAGGCGAAAGTAAAGGGTAACAAAGATGAAATTTCAAAGAAACCAATAAAAAAATCCCAAGCAAAGTTGCACCATTATCAAGAAACTGTAACTAATAAAACTGAAGGTGACTCTGTCAAGTGTACCATGAAGATTGTTACAGGAATCAACCAAGTTGCAGAATCATGCAATGGAAGCAATGAAGAATGCCAACATCCACATGTTAAGAATTCTGAATGCAAAAATGAGATGGAGCTAGAATGTGAAAAAGATCCTCAACCAAATGGTGCAATACTATTGAATTCAACTATGCCTGATCTTGTATCTTATGAGGTTCCTGTTGGAGTGTAG 1338 0.3879 MMESENGVVVEEEKHVIGVTTEDNIKKEVENNCNVAEIQIKNEEPKPKVETEVPNSAGDTAAVKSSLTSSASKKSKRAKEPGLRAVDASKNNKKSKDKPILKGTTSTSQKQRPTLSQSLTFPAKSTRRNAMHKSIDDGHNSVKAKVKQVLDNGTKADASILHSNKSINSEVKSKEAKVDTRSFKRSVSVFGRSTPVNGVAKNHPSEASPGATTQRNSGSRFSFRLEERAEKRKEFFSKLEEKIHAMEAEKTNMQEKSKENQEAEIKKLRKALTFKATPMPSFYKEPPSKVVLKKIPTTRPKSPKLGRNKGSAMNNIPEEDKSCSSPHEKQQQNDSTKAKVKGNKDEISKKPIKKSQAKLHHYQETVTNKTEGDSVKCTMKIVTGINQVAESCNGSNEECQHPHVKNSECKNEMELECEKDPQPNGAILLNSTMPDLVSYEVPVGV* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0339 445 MobiDBLite consensus disorder prediction 193 220 - -
Lan19g0339 445 PANTHER PROTEIN WVD2-LIKE 4 2 208 IPR044833 GO:0008017
Lan19g0339 445 PANTHER PROTEIN WVD2-LIKE 4 213 445 IPR044833 GO:0008017
Lan19g0339 445 Coils Coil 236 271 - -
Lan19g0339 445 MobiDBLite consensus disorder prediction 278 360 - -
Lan19g0339 445 Pfam Targeting protein for Xklp2 (TPX2) domain 221 290 IPR027329 -
Lan19g0339 445 MobiDBLite consensus disorder prediction 193 222 - -
Lan19g0339 445 MobiDBLite consensus disorder prediction 101 127 - -
Lan19g0339 445 MobiDBLite consensus disorder prediction 42 142 - -
Lan19g0339 445 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 213 445 - -
Lan19g0339 445 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 2 208 - -
Lan19g0339 445 MobiDBLite consensus disorder prediction 321 360 - -
Lan19g0339 445 MobiDBLite consensus disorder prediction 73 100 - -
Lan19g0339 445 MobiDBLite consensus disorder prediction 58 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0339 Lan-Chr19 4135311 4140287 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0339 - - lang:109334921 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1064 5 23939180 23944146 Lan19g0339 19 4135311 4140287 LSH