Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0328 ATGAAACCCATCAACTTCTTTTTAGTAAAGCCTTCACCTTTAACCATTTTTATCATCATTCTCATTTTCTCCATTCTGGGTTTCTATTCTCTGCATTACCCTAACCCTTCTTCATTTTCCCAAAATACCCTTCACTTCCAAAACCTCTTCCTTTCTTCTTCTTCCAACTCCACCCTCTCCACCTACCTCCGCGCCCTCACCGTACACCCTCACCTCGCTGGAACAAAACTCGCTGCCGACACCACCACCTATGTCGCCGACCACTTCAGGAGCCACGGCCTCACCACACACACTGTTGATTACAACGTGTTGCTATCTTACCCGGTTTATTCTTCCATTGCGGCGCATTTTAGCAGCGGTTCAGTAAGGCATCTTCTGTTGACCGAACCGGACCGGTTCGACGTGGTGAAACCGTACCATGCTTACTCACCTTCTGGTTCAGTTTTCGCCAGGGTGGTTTTCGTGAACTATGGAAGGGAGAGGGACTACCATGCTCTGGAGAAATTAGGAGTGGCGGTTTCGGGCTGCATCGTGGTGGTGAGGAAGGGAAGTGGCGGAGGGTTGGGACGGGGCGCGGTGGTGGAGAAGGCGGAGGAGAAAGGTGCCATAGCGGTGCTGATTTACAACAATGACGATGGTGGTGATTACACGTGGCGCGAGGGGTTTGAGAGGGGTCACGTGATGAGGGGTGGGGTGGGGGACCCACTTAGTCCAGGTTGGGCTGGGGTTGAAGGAAGTGAGAGATTGGGGTTGGAAGATAGTGAAGTTTTGAAAAAGTTCCCAAAAATTCCATCTTTACCCTTGTCTTTTGAGGTTGCAGAGACTATTTTGTCCTCACTTGAAGGTACTTCTGTGCCTTTGGAATGGAGGGGTACCCTAGGGTCTAAGGTTAGGAATGTTGGTCCTGGTCCCACCATGCTCAATTTCACTTACCAGGGTGAAAATAAGATGGCCACCATTCAAAATGTTTTTGCCGTCATAAAGGGATCAGAAGAACCTGATCGCTATGTTCTGCTTGGGAACCATAGAGATGCATGGACATACGGCGCAGTTGATCCCAGTAGTGGGACAGCAGCCCTACTTGACATTGCACGTCGATACTCTATTCTATTGAGTTCGGGATGGACACCGAGGAGGACAATCATTCTCTGCAGTTGGGATGCGGAGGAATTTGGAATGATAGGATCTACCGAGTGGGTTGAACAAAACCTTGTCAATCTGGGTTCCAAAGCTGTAGCGTACCTTAATGTGGACTGCGCTGTTCAAGGGCCTGGTTTCTTTGTTGGCTCTACTCCCCAGCTAGACAGTCTTGTTGTTGAGGTCACAAAAAAGGTCAAGGATCCTGATACTGAGGGTGCATCAGTATACAAGAATTGGGCTGCCGCTGGTGGAGACTCCAATATTCAGAGGCTGAGTAGAGTTGATTCTGATTTTGCTCCGTTTGTGCAACATGCAGGGGTTCCATCAATTGATATGTATTATGGAAAAGAATTTCCTGTATATCACACTGCTTTTGACTCATATGACTGGATGACACAGTATGGAGATCCATTCTTCCATCGCCATGCCGCCGTTGCTGGAATTTGGGGACTTCTAGCTCTTCACCTGGCTGATGATTCCATTCTTCCTTTCGATTACGTTCCATATGCAAATCAGTTACAGTTTTACATGAACATTTTGAGCAGCTTGTTAGACCAGCAAACTTCTCTACATCCGTTGAATATGTCAATTCAAGAATTTGCTTCGGCAGCCAAGGAAACTAACAATGAATCAAAGAAACTGAGATTGCAAGAAACATCAGGTCATTCCGTAGATATAAAAAACCGAGCGTTGAATGACAGACTGATGCTTGCTGAAAAAGGCTTCCTGGATGCAGATGGGCTTCAAGGAAGGCAGTGGTTCAAGCATCTTGTTTTCGGGCCTCCCAGCGACCATGAAAGCAAGCTGGATTTCTTTCCCGGGATTGCAGATTCTATCAGTCGATCAACGGGGATGAGTGAAAGAGAAAGGCTGGCAGCCATTCAGCATGAGGTATGGAGGGTGTCCAGATCTATTCAAAGAGCTGCTTCTGCTCTGAGAGGAGAATTCACCTAG 2094 0.4771 MKPINFFLVKPSPLTIFIIILIFSILGFYSLHYPNPSSFSQNTLHFQNLFLSSSSNSTLSTYLRALTVHPHLAGTKLAADTTTYVADHFRSHGLTTHTVDYNVLLSYPVYSSIAAHFSSGSVRHLLLTEPDRFDVVKPYHAYSPSGSVFARVVFVNYGRERDYHALEKLGVAVSGCIVVVRKGSGGGLGRGAVVEKAEEKGAIAVLIYNNDDGGDYTWREGFERGHVMRGGVGDPLSPGWAGVEGSERLGLEDSEVLKKFPKIPSLPLSFEVAETILSSLEGTSVPLEWRGTLGSKVRNVGPGPTMLNFTYQGENKMATIQNVFAVIKGSEEPDRYVLLGNHRDAWTYGAVDPSSGTAALLDIARRYSILLSSGWTPRRTIILCSWDAEEFGMIGSTEWVEQNLVNLGSKAVAYLNVDCAVQGPGFFVGSTPQLDSLVVEVTKKVKDPDTEGASVYKNWAAAGGDSNIQRLSRVDSDFAPFVQHAGVPSIDMYYGKEFPVYHTAFDSYDWMTQYGDPFFHRHAAVAGIWGLLALHLADDSILPFDYVPYANQLQFYMNILSSLLDQQTSLHPLNMSIQEFASAAKETNNESKKLRLQETSGHSVDIKNRALNDRLMLAEKGFLDADGLQGRQWFKHLVFGPPSDHESKLDFFPGIADSISRSTGMSERERLAAIQHEVWRVSRSIQRAASALRGEFT* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0328 697 SUPERFAMILY PA domain 103 324 IPR046450 -
Lan19g0328 697 Pfam PA domain 149 217 IPR003137 -
Lan19g0328 697 SUPERFAMILY Transferrin receptor-like dimerisation domain 543 695 IPR036757 -
Lan19g0328 697 Coils Coil 577 597 - -
Lan19g0328 697 Gene3D - 548 697 IPR036757 -
Lan19g0328 697 CDD M28_PSMA_like 318 544 - -
Lan19g0328 697 SUPERFAMILY Zn-dependent exopeptidases 57 541 - -
Lan19g0328 697 Pfam Transferrin receptor-like dimerisation domain 569 692 IPR007365 -
Lan19g0328 697 Pfam Peptidase family M28 322 509 IPR007484 -
Lan19g0328 697 Gene3D Zn peptidases 57 543 - -
Lan19g0328 697 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 18 695 IPR039373 -
Lan19g0328 697 Gene3D - 111 313 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0328 K01301 - gmx:100818733 1040.41