Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0305 ATGGAAGAAGAATCACTTCCTCCACCGTCTCAATTATCAACTCGCCGTCCCAAGAGAGGAAGACCTCCTAAACCTAAGCAAAACGACGTCGTTGTCGAACACCGTGAGAGTTCGCCTGAAGAATTCGATGAAGCACCGCGACCGAAATCAAAACGAGGTCGTTTTAAGGAAGGAACTTCAACTACTGCTGATGCTGCTCAAAACGCCTCTGATCTAACCTTGATTGAGGTGATCAAAGGCAATGGTAAACTTATTCCTCATGCTGTCAAACTTTGGGTTGAACGCTATGAGAAGGAACCAAAACCTGCAATGGGTGAACTATTGACAATGTTGTTTCAGGCATGTGGAGCCAAGGATTACAAATGTGATCTCGTGGACGAGGCTGATGTCGATGATGTTGTAGTTGCTGTGGTCAACTGTGCTAAAAATGGTGAAGTTGACGACTATCATAATTCCAAGAAGAAGGAGTTTAAAAACTTCAAAGAGAATCTAGAATCACTATGGGATAATTTGGTTTGTGAATGTCAGCATGGCCCATTGTTTGATCAAGTTTTATTTGACAAGTGCATGGACTATATCATTGCACTGTCATGCACCCCTCCAAGAGTTTACCGTCAAGTTGCTTCATTAATGGGACTTCGGCTTGTCACATCATACATAACTATTGCTAATATGCTTGGTGCACAAAGAGAGACTACACGTAGACAATTGGATGCTGAAAAAAAGAAAAGAAAAGAGGGACCTCGGGTGGAGTCACTAAATAAAAGGTTTTCAGATACTCATGAGAAAATAACATTGTTGGAGGAGATGATGCGCAAAATATTTACTGGGTTATTTGTGCACCGTTACAGAGACATTGACCCAAATATTAGAATGTCATGCATTGAGTCGCTGGGTGTATGGATCCTGTCATACCCATCACTTTTTCTGCAAGATTTGTACTTGAAATATCTTGGATGGACACTGAATGACAAAAATGCTGGTGTTAGAAAGACTTCTATAAGTGCACTGCAAAATCTCTATGAGGCAGATGATAATGTACCAACCCTTGGTTTATTTTCTGAAAGATTTTCTGGGCGGATGATTGAGCTTGCTGATGACATTGACGTTTCTGTGGCTGTTTGTGCCATAGGGCTTGTTAAACAACTACTAAGACATCAACTTATCCCTGAAGATGACTTGGCTCCTCTGTATGATTTGTTGATCGATGATCCTCCTGAAATCAGGCATGCCATTGGAGCATTAGTGTACGATCACTTGATTGCTCAAAAATTTAATAGCTCCCAATCAGTACCAAGAGACAATTTCTCTGCAGGTGAAACAGACAATTCTTCTGAAGTCCATCTCAAGAGGATGTTGCGAATTCTGGAGGAATTCCCGCAAGATCCAATTTTGAGTATTTATGTGATTGATGATGTCTGGGACTACATGACAGCTATAAAGGATTGGAAATGCATTGTATCCATGCTTCTTGATGAAAACCCATTGATTGAGCTCTCTGACAGTGATGCATCAAACTTGGTGCGGCTCCTGTGTGCATCTGTGAAAAAGGCTGTTGGAGAGAGGATCGTTCCTGCTACTGACAACAGAAAGCAATATCACAACAAAGCCCAAAAAGAAGCATTTGAAAGTAATAAACAGGATATAACTGTTGCCTTGATGAAGAGTTACCCATTACTCTTGCGGAAGTTCATTTCAGATAAAGCAAAAGTGTCATCACTGGTTGAGATTGTTTTGTATATGAACCTTGAGCTTTATTCCTTGAAGAGACAGGAGCAGAATTTCAAAAATATCCTCCAGCTCATGAAAGATGCATTTTTCAAGCATGGTGACAAAGACCCCCTGAGAGCTTGTGTGAAGGCAATTAATTTTTGTTGCATAGAAAGTCAAGGGGAGTTGCAAGATCTTGCTCGCAATAAATTAAAGGAACTCGAGGATGAACTCATTGTGAAGCTGAAATCTGCAATTAAAGAAGTAGTGGATGGTGGTGATGAATATTCTCTTCTTGTAAACTCTAAGAGGTTGTATGAACTTCAATTGTCAAGATCTGTGCCTATTAATAACATATATGAAGACATTGTCATGCTGCTACGAGGTTTTAGGAATATGGAGGATGAGGTTGTTGGCTTCCTGCTTCTGAACATGTATTTGCACCTAGCTTGGGGTCTGCAATCTATTATAAATGTAGAAATTATTTCTGAAGCATCCTTAACTTCTCTTCTGTACAAGCGTGATACCTTGTTACAAGAACTTGAATACTTCTGCAACTTAGCTACCGACAGCAAGGAAGATGGTAGACAAGGAAGTGAATTAGCTTGCAGGGTATGCGTCATACTTGCAGAAACATGGTTCTTATTTAGAAAGACAAATTTCTCGAAGACAAAGTTGGGAAGATTAGGATATGAGCCAAATGAAGACATGCTTCGGAAATTCTGGGAACTTAGTGAACAACAGCTTAATAATTCAGAGGGAGAAGATGAAGATGTTAATAGAGAGTATTCTGAGGAGACAAATAAAGATACTGTTATGATTGCTGCCGCAAAGCTGGTCGTTAGTGATGTTGTTCCAAAGGAATATCTTGCTTCTGAGATTATTTCTCATTTTGTAATGCACGGGACAAGTGTGGCTGAGATTGTAAAGCATCTGATCACAGTTCTGAAGAAAAACGATGATGATTTAGCTGCTATTTTTCTGGAAGCACTTAAAAAGGCATATCATCGGCATGCTGTGGATATATCTGGCAGTGAGAATGATTCCTCAGATAGCAACTCTTTATCGGGGTGTAAAGATCTGGCTGCTCGGCTTTCTGGAATATTTATTGGCGCTGCCCGGATCAAACACAAGTCTGCCATTTTAAATATTGTCAGGGATGGTATTGAATATGCTTTTGTAGATGCTCCAAGACAGTTGTCTTTTCTGGAAGCAGCAGTGCTCCATTTTGTTCCAAAACTCCCTGCATCAGATGTGTTGGAAGTTATGGACAATGTTCAAAAGCGAACAGAAAATGTCAATACAGAGGAAGATCCCAGTGGCTGGCGTCCCTATCACACATTTATTAGCTTACGTGAAAAATATGCAAAGAATGAGGGCAATCAAGATGAGAAAGAAGGGGTTTCTGTAAGGCGCAGGGGTCGTCCTCGTAAGCAGCAAAACATAGAAGGAAAGAAGCTTTTTGATGAGCAGAGTTCAAGTGAAGACGAGGAATCCATTAGTGAATACGAAAAGGATGCACAAGATGAAGAGGGGAGGCAAGAGGAGGATGATGAAGACGTTCCTTTGATAAACTCAATAAAATTATCATCCAAGTTAAGGTCGCTGGGAAATAAAGCTCAAACCAAGGCAGGGACTTCTGTGAAAGCTGTAGATGACATATCTGCTTCTAGAACATCAGGGGCTTCCAACTAG 3405 0.4056 MEEESLPPPSQLSTRRPKRGRPPKPKQNDVVVEHRESSPEEFDEAPRPKSKRGRFKEGTSTTADAAQNASDLTLIEVIKGNGKLIPHAVKLWVERYEKEPKPAMGELLTMLFQACGAKDYKCDLVDEADVDDVVVAVVNCAKNGEVDDYHNSKKKEFKNFKENLESLWDNLVCECQHGPLFDQVLFDKCMDYIIALSCTPPRVYRQVASLMGLRLVTSYITIANMLGAQRETTRRQLDAEKKKRKEGPRVESLNKRFSDTHEKITLLEEMMRKIFTGLFVHRYRDIDPNIRMSCIESLGVWILSYPSLFLQDLYLKYLGWTLNDKNAGVRKTSISALQNLYEADDNVPTLGLFSERFSGRMIELADDIDVSVAVCAIGLVKQLLRHQLIPEDDLAPLYDLLIDDPPEIRHAIGALVYDHLIAQKFNSSQSVPRDNFSAGETDNSSEVHLKRMLRILEEFPQDPILSIYVIDDVWDYMTAIKDWKCIVSMLLDENPLIELSDSDASNLVRLLCASVKKAVGERIVPATDNRKQYHNKAQKEAFESNKQDITVALMKSYPLLLRKFISDKAKVSSLVEIVLYMNLELYSLKRQEQNFKNILQLMKDAFFKHGDKDPLRACVKAINFCCIESQGELQDLARNKLKELEDELIVKLKSAIKEVVDGGDEYSLLVNSKRLYELQLSRSVPINNIYEDIVMLLRGFRNMEDEVVGFLLLNMYLHLAWGLQSIINVEIISEASLTSLLYKRDTLLQELEYFCNLATDSKEDGRQGSELACRVCVILAETWFLFRKTNFSKTKLGRLGYEPNEDMLRKFWELSEQQLNNSEGEDEDVNREYSEETNKDTVMIAAAKLVVSDVVPKEYLASEIISHFVMHGTSVAEIVKHLITVLKKNDDDLAAIFLEALKKAYHRHAVDISGSENDSSDSNSLSGCKDLAARLSGIFIGAARIKHKSAILNIVRDGIEYAFVDAPRQLSFLEAAVLHFVPKLPASDVLEVMDNVQKRTENVNTEEDPSGWRPYHTFISLREKYAKNEGNQDEKEGVSVRRRGRPRKQQNIEGKKLFDEQSSSEDEESISEYEKDAQDEEGRQEEDDEDVPLINSIKLSSKLRSLGNKAQTKAGTSVKAVDDISASRTSGASN* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0305 1134 MobiDBLite consensus disorder prediction 23 58 - -
Lan19g0305 1134 PANTHER LD34181P-RELATED 13 1102 - -
Lan19g0305 1134 MobiDBLite consensus disorder prediction 1 65 - -
Lan19g0305 1134 Pfam STAG domain 149 255 IPR013721 -
Lan19g0305 1134 Gene3D - 250 458 IPR011989 -
Lan19g0305 1134 SUPERFAMILY ARM repeat 252 630 IPR016024 -
Lan19g0305 1134 ProSiteProfiles Stromalin conservative (SCD) domain profile. 279 364 IPR020839 -
Lan19g0305 1134 MobiDBLite consensus disorder prediction 1064 1088 - -
Lan19g0305 1134 PANTHER STROMAL ANTIGEN 13 1102 IPR039662 -
Lan19g0305 1134 Coils Coil 627 647 - -
Lan19g0305 1134 MobiDBLite consensus disorder prediction 1098 1115 - -
Lan19g0305 1134 MobiDBLite consensus disorder prediction 1026 1134 - -
Lan19g0305 1134 MobiDBLite consensus disorder prediction 1026 1063 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0305 Lan-Chr19 3399536 3409169 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0305 K06671 - gmx:100810550 1698.33