Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0929 ATGTACATTCACAGGGAGCGAGAGAAAGAACGAGTACCTGTTCCCTCCAAAACGGTGCTTGTTCAGAAGCGACTCAACCACGTCGTTGATCGATCCTCGCCGTCCACTTCCAAACCAATCAACGGCGCCAATGACAGCTCCGCCGCTAACAAGGCCTCTCGCTCCGCCTCCAACCATTCCAACTCTTTTAATGAAGAATCTGAAACAGATAGCGATGAGTCTGATGTTAGTGGCTCTGGTGAAGATGACACGTCATGGATATCTTGGTTCTGCAATTTGAGAGGGAATGAATTCTTTTGCGAGGTTGATGATGATTATATTCGAGATGATTTTAACTTAAGTGGATTAAGCACTCAAGTCCCTTACTATGATTATGCTCTTGATTTAATTTTGGATGTTGTATCCTCTCATGGTGACACGTTTAGGGAAGAACGTAATGAGTTAATTGAGTCAGCCGCCAAGATGCTTTATGGTCTCATGCATGCTCGGTTCATATTGACAAGTAAAGGAATGGCTGCAATGTTGGACAAGTACAGAAACTATGATTTTGGTAGATGTCCAAGACTTTACTGCAATGGACAGCCTTGCCTTCCTGTGGGTCAGTCGGATATTGTTCGGTCAAGTAGTGTGAAAATATATTGCCCAAGGTGTGAAGACATTTACTCTCCCAGCTCCAAGTATCAAGACAACACTAATGGTGCTTATTTCGGAACTACTTTTCCTCACCTCTTCCTGATGACTTATGAACAATTGAAGCCACAGAAGCCATCACAGAAATATGTTCCTAGAGTTTTTGGCTTCAAACTTCACAAGCCACGAAGCTGA 825 0.4339 MYIHREREKERVPVPSKTVLVQKRLNHVVDRSSPSTSKPINGANDSSAANKASRSASNHSNSFNEESETDSDESDVSGSGEDDTSWISWFCNLRGNEFFCEVDDDYIRDDFNLSGLSTQVPYYDYALDLILDVVSSHGDTFREERNELIESAAKMLYGLMHARFILTSKGMAAMLDKYRNYDFGRCPRLYCNGQPCLPVGQSDIVRSSSVKIYCPRCEDIYSPSSKYQDNTNGAYFGTTFPHLFLMTYEQLKPQKPSQKYVPRVFGFKLHKPRS* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0929 274 ProSitePatterns Casein kinase II regulatory subunit signature. 186 217 IPR000704 GO:0005956|GO:0019887
Lan18g0929 274 Pfam Casein kinase II regulatory subunit 85 268 IPR000704 GO:0005956|GO:0019887
Lan18g0929 274 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 78 182 IPR016149 GO:0005956|GO:0019887
Lan18g0929 274 PRINTS Casein kinase II regulatory subunit family signature 85 101 IPR000704 GO:0005956|GO:0019887
Lan18g0929 274 PRINTS Casein kinase II regulatory subunit family signature 102 116 IPR000704 GO:0005956|GO:0019887
Lan18g0929 274 PRINTS Casein kinase II regulatory subunit family signature 157 178 IPR000704 GO:0005956|GO:0019887
Lan18g0929 274 PRINTS Casein kinase II regulatory subunit family signature 182 203 IPR000704 GO:0005956|GO:0019887
Lan18g0929 274 PRINTS Casein kinase II regulatory subunit family signature 204 225 IPR000704 GO:0005956|GO:0019887
Lan18g0929 274 PRINTS Casein kinase II regulatory subunit family signature 232 249 IPR000704 GO:0005956|GO:0019887
Lan18g0929 274 PANTHER CASEIN KINASE II SUBUNIT BETA 12 271 IPR000704 GO:0005956|GO:0019887
Lan18g0929 274 MobiDBLite consensus disorder prediction 1 80 - -
Lan18g0929 274 SUPERFAMILY Casein kinase II beta subunit 83 272 IPR035991 GO:0005956|GO:0019887
Lan18g0929 274 Gene3D - 183 257 - -
Lan18g0929 274 MobiDBLite consensus disorder prediction 28 64 - -
Lan18g0929 274 PANTHER CASEIN KINASE II SUBUNIT BETA-2 12 271 - -
Lan18g0929 274 SMART CK_II_beta_2 85 268 IPR000704 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0929 Lan-Chr18 14523695 14526040 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0929 K03115 - gmx:100793573 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0929 18 14523695 14526040 Lan18g0929 18 14523695 14526040 ECH