Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0906 ATGGCAACTTCCCTGTTGTTGTTGTTACTCTTGTTCATGCTCTCAATCTCACACTCATCACAAATGCTCCTATTACCCCTCACCCACTCACTCTCCATAACCCAATTCAACGCCACCCACCACCTCCTCAAATCCACCTCCACCCGCTCCTTAGCCCGCTTCCACCGCCACCACAACCACCACCACCGCCGCCACCAGAGCCACCAACTCTCCCTCCCACTCTCACCAGGCAGTGACTACACCCTATCATTCAACTTAGGGTCCCAACCAATAACCCTCTACATGGACACAGGAAGCGACCTTGTTTGGTTCCCATGCTCCCCCTTCGAGTGCATCCTCTGCGAAGGTAAACCCAACCCTACCAAACCCCACAATCTCACTCTCTCTCAATCTCACACCGTTTCATGCCAATCCCATGCATGTTCTGCTGCTCATAATCACGTGCCGAATTCTAACCTCTGCGCTATTGCACGCTGCCCCTTAGACTCTATCGAAGTACGAGATTGCTCTTCTGTCACGTGCCCACCTTTCTACTATGCTTATGCTGATGGAAGTTTAATCGCTAACCTCTATAGGAGGGAACGAGTTAACCCACCGAGTCCACTCATTCTCGGTCGTTATGATAACGCCGGTGGTGAAGAAGTTGAGTTTGTTTACACCTCTATGCTTCGAAACCCGAAGCATCCTTATTTCTACTGTGTTGGGCTCGTTGGAATCTCTGTCGGGAAGAAAACTATTCCGGCGCCGGAGATGCTGAAAAGGGTGGATTATAAAGGGAGTGGCGGGGTGGTTGTTGATTCCGGCACGACGTTTACGATATTACCGGCGAGTTTCTATAACTCGGTGGTTGATGAATTCGATAATCGAGTTGGAAGAGTTCACGTGCGTGCGAGTGAGATTGAGAAAAAAACGGGTCTCGGACCGTGTTATTACTTGGACCGAGTTTCGGAGGTTCCAACGGTGTCGTTTCATTTCGTTGGGAATGGTTCCAGTGTGGTCCTGCCTACGAGGAATTACTTCTACGAGTTTTTGGACGGTAGTGATGGAGTTAGAAGGACGAGGAAAGTGGGGTGTATGATGTTAATGAACGGTGGTGATGAAACTGAGTTAAGTGGTGGGCCCGGAGCAACTCTAGGTAATTATCAACAGCAGGGTTTTGAGGTTGTGTACGACTTGGAGAAGCAGCGCGTGGGTTTCGCGCGGAGGCATTGCGCGTCGCTTTGGGATAGCATAAACCATGTGAAAAACTAA 1251 0.4996 MATSLLLLLLLFMLSISHSSQMLLLPLTHSLSITQFNATHHLLKSTSTRSLARFHRHHNHHHRRHQSHQLSLPLSPGSDYTLSFNLGSQPITLYMDTGSDLVWFPCSPFECILCEGKPNPTKPHNLTLSQSHTVSCQSHACSAAHNHVPNSNLCAIARCPLDSIEVRDCSSVTCPPFYYAYADGSLIANLYRRERVNPPSPLILGRYDNAGGEEVEFVYTSMLRNPKHPYFYCVGLVGISVGKKTIPAPEMLKRVDYKGSGGVVVDSGTTFTILPASFYNSVVDEFDNRVGRVHVRASEIEKKTGLGPCYYLDRVSEVPTVSFHFVGNGSSVVLPTRNYFYEFLDGSDGVRRTRKVGCMMLMNGGDETELSGGPGATLGNYQQQGFEVVYDLEKQRVGFARRHCASLWDSINHVKN* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0906 416 Gene3D Acid Proteases 208 410 IPR021109 -
Lan18g0906 416 Pfam Xylanase inhibitor C-terminal 232 400 IPR032799 -
Lan18g0906 416 CDD pepsin_A_like_plant 80 404 IPR034161 -
Lan18g0906 416 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 193 411 - -
Lan18g0906 416 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 4 192 - -
Lan18g0906 416 Pfam Xylanase inhibitor N-terminal 80 184 IPR032861 -
Lan18g0906 416 ProSiteProfiles Peptidase family A1 domain profile. 80 400 IPR033121 -
Lan18g0906 416 PANTHER ASPARTYL PROTEASES 193 411 IPR001461 GO:0004190|GO:0006508
Lan18g0906 416 PANTHER ASPARTYL PROTEASES 4 192 IPR001461 GO:0004190|GO:0006508
Lan18g0906 416 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 263 274 IPR001969 GO:0004190|GO:0006508
Lan18g0906 416 Gene3D Acid Proteases 56 204 IPR021109 -
Lan18g0906 416 SUPERFAMILY Acid proteases 75 409 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0906 Lan-Chr18 14328711 14330428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0906 62 407 Miscellaneous Gene Families AT1G77480 23.020 8.08e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0906 - - adu:107488223 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0906 18 14328711 14330428 Lan18g0906 18 14328711 14330428 ECH
Lan18g0906 18 14328711 14330428 Lan6g0347 6 2691643 2693431 LSH