Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0905 ATGAATAATGCAAAGGGAAAGGGAAAATACAAGGATATTGTTATAGGAGGTGACTTTGGTAGCAGTAATAGGACCAAATCTTTTTATCCTCCAATTGAGACACATTGGAGTCTTCCTAACAGTGAAGGTAAAAAGACTTCATTGTCCCCCATCAAGGCACTGTTGTCATACCCGCTCATGAAACTTAGAAGGAGCAAAAGCATGCAATTGATTCTTGAAGGTGCTCGTGATTCAAAGGACGCACAAATAGTCGAGGATTTCCGCAAAATGCTTCTTGTTGAGGGTCTTTTACCCCCTCAACATAATGATTATCATACTCTTTTAAGGTTTCTGCGAATGAGGGATTTTGATATGTCAGCAGCCAAAGACATGTTTCTGAATTACTTGAAATGGCGCGAGGAATCTCGAGTAGACATGCTTCCTAAGGAATTCAAATTCACAGAGTACACAGAAGTAAAGAAAATCTATCCTCATGGATTCCATGGAGTTGATAGAGATGGAAGACCCGTGTATATTGAGAGAATTGGGATGGTAGATGCTAACAAACTAATGCAAGTAACCACAATTGAAAGGTTTATCAAGTATCATGTGTCAGAGCAAGAGAAAACACTTAGAGTAAGATACCCTGCATGTTCACTGGCTTCTAAAAGGCATATTGCATCCACTACAAGTATCTTGGATGTCAATGGAGTAGGAATGTCTAATTTCTCGAAGCCCGCAAGGTACCTCTTTATGGAAATTCAGAAGATTAATAGTGATTACTATCCTGAGACTCTAAATCAGCTTTTTATTATTAATGCTGGATCTGGGTTTAGAATGCTGTGGAAAGCCGTGAAGACATTCCTAGATGTACGCACAGCAGCAAAAATTCAAGTGTTCGGCTCTAATTACCTCAGTGCGCTGCTTGAAGCTATTGATCCAGGTAATTTGCCTACTTTTCTTGGTGGTAACTGCACATGTTCTGACTATGGAGGTTGCCTGATGAGTGATCGAGGCCCCTGGAAAAGTCCAGAATTATTAGAAATGATTCAGGCCATTTCCATGAGAGAAGGGAACGGTGAAAATGGCGATGTGGTCTCAGAAGATCCCTTGACGCCCAAAAAGGTTGACATACAAAACAAAAATGAGTGTCGTACGAGTCTGGCTCTTGAGAAGACAACATGTACGTTAGCATTACAAAAAATCAATGGTCTAGAAGCTGCTATCGGAGACACCAAGAATATAATCAAGAAACTTGAAGATTCACTTCAGGACACCAAGATGGCCTTAAAAGAACTTGCACAGCACATAGAAGAGTTAAAAACTTGA 1308 0.4021 MNNAKGKGKYKDIVIGGDFGSSNRTKSFYPPIETHWSLPNSEGKKTSLSPIKALLSYPLMKLRRSKSMQLILEGARDSKDAQIVEDFRKMLLVEGLLPPQHNDYHTLLRFLRMRDFDMSAAKDMFLNYLKWREESRVDMLPKEFKFTEYTEVKKIYPHGFHGVDRDGRPVYIERIGMVDANKLMQVTTIERFIKYHVSEQEKTLRVRYPACSLASKRHIASTTSILDVNGVGMSNFSKPARYLFMEIQKINSDYYPETLNQLFIINAGSGFRMLWKAVKTFLDVRTAAKIQVFGSNYLSALLEAIDPGNLPTFLGGNCTCSDYGGCLMSDRGPWKSPELLEMIQAISMREGNGENGDVVSEDPLTPKKVDIQNKNECRTSLALEKTTCTLALQKINGLEAAIGDTKNIIKKLEDSLQDTKMALKELAQHIEELKT* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0905 435 Gene3D - 57 134 - -
Lan18g0905 435 SUPERFAMILY CRAL/TRIO domain 148 343 IPR036865 -
Lan18g0905 435 Coils Coil 395 435 - -
Lan18g0905 435 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH11 21 433 - -
Lan18g0905 435 Pfam CRAL/TRIO domain 157 316 IPR001251 -
Lan18g0905 435 PRINTS Cellular retinaldehyde-binding protein signature 106 128 - -
Lan18g0905 435 PRINTS Cellular retinaldehyde-binding protein signature 275 294 - -
Lan18g0905 435 PRINTS Cellular retinaldehyde-binding protein signature 308 317 - -
Lan18g0905 435 SMART sec14_4 148 319 IPR001251 -
Lan18g0905 435 CDD SEC14 149 317 IPR001251 -
Lan18g0905 435 SMART CRAL_TRIO_N_2 103 128 IPR011074 -
Lan18g0905 435 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 148 322 IPR001251 -
Lan18g0905 435 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 21 433 - -
Lan18g0905 435 SUPERFAMILY CRAL/TRIO N-terminal domain 77 141 IPR036273 -
Lan18g0905 435 Gene3D - 136 347 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0905 Lan-Chr18 14318806 14323775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0905 107 313 Acyl Lipid Metabolism Gene Families AT5G47730 30.144 4.97e-22 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0905 - - gmx:100797170 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0905 18 14318806 14323775 Lan18g0905 18 14318806 14323775 ECH