Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0889 ATGACTATGGATTGGGATGCTTGTACGGATGAATACGAAAAGCTCATAATTCGAATGAGCACTCCAAGGGTTGTCATTGATAATGCCGTATGCCCCACCGCGACTCTGGTCAAGGTTGATAGTGCTAGAAGGCATGGTATTCTCTTGGATGCTGTAGAAGTTCTTACTGATCTCAACCTCTTAATTAAGAAGGCCTATATTTCATCTGATGGAAGGTGGTTCATGGATGTTTTCCATGTCACATATCAAAACGGAAACAAGCTAACAGATGAGAGAGTTTTGAAATATATTGAACAGGCACTTGGGTGCATTGACAATGGTAGAACCATTGGATCGAATGGTCTGACTGCATTGGAGTTAACCGGAACAGACAGAGTTGGTCTTCTGTCAGAGGTGTTTGCTGTACTGGCTGATCTTCAATGCGACGTGGTTGAGGCTAAGGTTTGGACTCACAATGGCCGCATTGCGTCCCTGATCTATGTAAAGGACTGCGATTCTGGGTCCACTATTGAGGACTCTCAGAAAATTAATAAAATTGAAGTGCGTTTAAGAAATGTTTTGAAGGGAGACAATGACATTAGAAGTGCTAAAACTTCTGTCTCCATGGCTGTAACTCACACTGAAAGAAGGCTGCATCAAATGATGTTCACTGACCGTGATTTTGAAAGAACCCCGATTTTGAAGTTTACTGCTGATGCCCCATTAGTGACTGTTCAGAATTGGGCAGAAAGGGGTTATTCGGTTGTCAATATTCAATGCAAAGATCGAATGAAACTATTATTTGATGTTGTATGCAATTTGACATACATGGAATATATTGTGTTTCATGCAACTGTTAACACTGATAGTGTCCAAGCATACCTGGAATTTTACATCAGACATAAGGATGGCACCCCAATTAGTTCGGAACCGGAGCGTCAACGTGTAATACAATGCTTAAAGGCTGCAGTAGAGAGAAGGGCATCCGAGGGTGTTCGACTCGAGTTATGCACGGAAGACAGGCAAGGGCTTCTAGCAGAAGTAATGAGAACTTTCAGAGAAAATGGGCTCAATGTGACCAGGGCTGAGGTATCAACCATGGGGAACAAGGTTACAAATGTGTTCTATGTAACAGATGCTATTGGAAACCCTGCTGATCCAAAAATCATTGAATCGGTTAGGCAGAAAATTGGGTTCAGCAATTTAGAAGTTAAGGAGTTGCCATTGGTATGTCACCAGCAGAAAGCAGAAAGAGAGGATCAAGCATTTGGAGTTGGTGGGGCAGTGTTGATGTCAATTGGTAACCTCTTGAGAAGGAATCTCTACAATATGGGGCTAATCAATTCCTGTTCTTAA 1335 0.4225 MTMDWDACTDEYEKLIIRMSTPRVVIDNAVCPTATLVKVDSARRHGILLDAVEVLTDLNLLIKKAYISSDGRWFMDVFHVTYQNGNKLTDERVLKYIEQALGCIDNGRTIGSNGLTALELTGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCDSGSTIEDSQKINKIEVRLRNVLKGDNDIRSAKTSVSMAVTHTERRLHQMMFTDRDFERTPILKFTADAPLVTVQNWAERGYSVVNIQCKDRMKLLFDVVCNLTYMEYIVFHATVNTDSVQAYLEFYIRHKDGTPISSEPERQRVIQCLKAAVERRASEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRAEVSTMGNKVTNVFYVTDAIGNPADPKIIESVRQKIGFSNLEVKELPLVCHQQKAEREDQAFGVGGAVLMSIGNLLRRNLYNMGLINSCS* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0889 444 ProSiteProfiles ACT domain profile. 117 201 IPR002912 -
Lan18g0889 444 CDD ACT_ACR_3 246 320 - -
Lan18g0889 444 SUPERFAMILY ACT-like 31 102 IPR045865 -
Lan18g0889 444 Gene3D - 115 190 - -
Lan18g0889 444 Gene3D - 322 396 - -
Lan18g0889 444 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 3 442 IPR040217 -
Lan18g0889 444 Pfam ACT domain 118 171 IPR002912 -
Lan18g0889 444 Pfam ACT domain 327 384 IPR002912 -
Lan18g0889 444 SUPERFAMILY ACT-like 322 395 IPR045865 -
Lan18g0889 444 CDD ACT_ACR_1 34 102 - -
Lan18g0889 444 CDD ACT_ACR_2 116 189 - -
Lan18g0889 444 CDD ACT_ACR_4 324 395 - -
Lan18g0889 444 ProSiteProfiles ACT domain profile. 326 400 IPR002912 -
Lan18g0889 444 SUPERFAMILY ACT-like 113 174 IPR045865 -
Lan18g0889 444 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 3 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0889 Lan-Chr18 14193689 14196803 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0889 - - gmx:100806283 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0889 18 14193689 14196803 Lan18g0889 18 14193689 14196803 ECH