Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0881 ATGGCACCAGCACTAGCCTTAAGAGTTGAAAGCTTAGCCACCAGTGGAATACAATCAATACCCAAGGAATATGTGAGGCCAGAAGAAGAGTTGAGTAACATAGCCAATGTGTTTGAAGAGGAAAAGAAGAAAGAAGGGCCTCAAGTTCCAACCATTGACTTGAAAGAAATGGAGTCAGAAGATGAGGAAGTTAGGGCAAAGTGTAGAGAGAAGTTGAATAAAGCAGCAGAAGAATGGGGTGTGATGTATTTGGTTAACCATGGGATACCAAATGAGGTTATAAATAGACTCAAGGAAGCTGGTGAAGCTTTCTTTTCTCTTCCTATTGAGGAGAAGGAAAAGTATGCTAATGATCAAGGGTCTGGGAAAATTCAAGGGTATGGTAGCAAGTTGGCTAATAATGCTAGTGGACAACTTGAGTGGGAAGATTATTTCTTCCATCTTGCTTTTCCTGAAGATAAACGTGACTTGTCTATTTGGCCCAAGACACCCTCTGATTATATTGAGGTTACAACCAAGTACACAAGGCAACTAAGAGAGCTCACAACAAAGATACTGGGGGCACTGTCTCTTTGTTTGGGAGTGGAAGAAGATAGACTAGAGAAGGAAGTTGGGGGTATGGAAGACCTTTTACTTCAACTGAAGATAAACTATTACCCCATTTGTCCCCAGCCAGAGTTAGCACTTGGAGTTGAAGCCCACACTGATGTAAGTTTACTCACTTTCCTCCTTCACAACATGGTCCCTGGTCTTCAACTCTTCTATGAGGGAAAATGGGTCATAGCAAAATGTGTCCCTGATTCCATTCTGGTGCACATTGGTGACACCCTTGAAATATTGAGCAATGGGAAATACAAGAGTATTCTTCATAGGGGATTGGTGAACAAGGAAAAAGTTAGAATATCTTGGGCAGTGTTCTGTGAGCCCCCAAAGGATAAGATAATATTGAAGCCACTATCAGAGCTTGTTACTGAGACTGAACCAGCTAAGTTTACTCCTCGTACTTTTGCTCAACATATTCAGCAAAAAATATTCAGGAAGAATAAGGAAGAGGGAAAAACTGCCAATAACATCCATGACAAAGTAGCATGCATGAATGTAAAGTTACTGAAATTACATTTGCCCTCTCAAGTAACCATGAGTATGCCATCCAGGATATTTATTGTAAAGATAATAAAATGGTCTCAGAGTCAAAGAAGAGGAAAGAAACCAGGTAGAATCTTATTCAGTTTTTTGCTCAGTGGTGTGTGTGGGAACAAAATGCTCCACTTAAGACCAGTCAGTAACTATTATTAG 1296 0.4043 MAPALALRVESLATSGIQSIPKEYVRPEEELSNIANVFEEEKKKEGPQVPTIDLKEMESEDEEVRAKCREKLNKAAEEWGVMYLVNHGIPNEVINRLKEAGEAFFSLPIEEKEKYANDQGSGKIQGYGSKLANNASGQLEWEDYFFHLAFPEDKRDLSIWPKTPSDYIEVTTKYTRQLRELTTKILGALSLCLGVEEDRLEKEVGGMEDLLLQLKINYYPICPQPELALGVEAHTDVSLLTFLLHNMVPGLQLFYEGKWVIAKCVPDSILVHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIILKPLSELVTETEPAKFTPRTFAQHIQQKIFRKNKEEGKTANNIHDKVACMNVKLLKLHLPSQVTMSMPSRIFIVKIIKWSQSQRRGKKPGRILFSFLLSGVCGNKMLHLRPVSNYY* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0881 431 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 210 309 IPR005123 -
Lan18g0881 431 Gene3D - 5 352 IPR027443 -
Lan18g0881 431 SUPERFAMILY Clavaminate synthase-like 7 346 - -
Lan18g0881 431 Coils Coil 54 74 - -
Lan18g0881 431 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 353 - -
Lan18g0881 431 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 353 - -
Lan18g0881 431 Pfam non-haem dioxygenase in morphine synthesis N-terminal 49 162 IPR026992 -
Lan18g0881 431 Pfam 2OG-Fe(II) oxygenase superfamily 214 309 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0881 Lan-Chr18 14128050 14145940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0881 9 347 Glycosyltransferase AT5G59530 28.530 2.08e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0881 K05277 - tcc:18606417 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0881 18 14128050 14145940 Lan18g0881 18 14128050 14145940 ECH