Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0880 ATGGACAAAGATTCACCTCATAATCTTCCTTCACCCTCACCTTCACCTTCTTCTTCTTCTTCTTCTAATCATGTGAAGCGTTTATTGAACTCTGATCATTATATTTCACCTTCCAAATCTTTATGTTCCGATAGATTCATACCATGTAGATCTACCTCCAATTTTGCTTTATTTGATATACCTTCATCTGAAAAAGATAACTCCACCGCTTATAATTCCCTTCTTCGTACAGCGTTATTCGGACCCAATGCTCCCGTTACGCCTGATAAACGGAGCTCCGGTAATATTTTCCGTTACAAAACGGAGACACGCCACAACATGCACGCTCTATCTCCCTTTCTCGTCCATGATGATGTGCGTCCTGATACTAATTACAATTATACCCCTGTCGTTAAGCCTCATAGGAAGGTTCCCAAATCTCCTTTCAAGGTTCTGGATGCCCCTGCATTGCAAGACGATTTTTATCTTAATCTTGTGGATTGGTCTTCCCACAATGTTTTGGCTGTGGGTTTGGGTAGCTGTGTGTATTTGTGGAACGCTTCTAGCAGCAAGGTAACTAGATTATGCGATTTGGGGATTGATGACTATGTTTGTTCAGTTGAATGGGCTCATCGTGGTACATACATTGCTGTTGGAACTAGCAAGGGTAAAGTCAAGATTTGGGATGCATCTCAATGCAAGACGATAAGAACGATGGACGGTCATCGACTACGTGTTGGGGCCTTGGCCTGGAGTTCATCTATTTTATCCTCTGGTGGCCGGGATAAAAGTATTTATCAACGAGATATACGTGTGAAGGAAGATTTTATCAGTAAAATGTCAGGGCACAAGTCAGAGGTTTGTGGACTGAAGTGGTCTTATGATAACCGTGAGCTGGCATCCGGAGGAAATGACAACAGATTGCTTGTGTGGAATAATCACTCAACCCAGCCTGTCCTGAAGTACTGTGAGCATACTGCGGCTGTTAAAGCTATAGCATGGTCTCCTCATGTTAATGGACTTCTTGCATCGGGGGGAGGTACTGCGGACCGATGTATTCGTTTCTGGAATACAACCACAAACTCACACTTAAACTGTGTGGATACTGGAAGTCAGGTTTGCAATCTTGTCTGGTCTAAAAATGTCAATGAGTTGGTAAGCACACATGGCTACTCCCAGAACCAGATAATAGTTTGGAAATATCCCTCCATGTCGAAGGTAGCAACTCTTACAGGCCATACTTATAGAGTTCTCTACCTTGCCGTCTCTCCTGATGGGCAGACTATTGTTACTGGAGCTGGAGATGAAACACTTAGGTTTTGGAATGTGTTTCCTTCCCAAAAATCACAGAATGCTGAGACTGAAATTGGAGCATTTTCTTTTGGAAGAACTACTATTAGGTGA 1383 0.4288 MDKDSPHNLPSPSPSPSSSSSSNHVKRLLNSDHYISPSKSLCSDRFIPCRSTSNFALFDIPSSEKDNSTAYNSLLRTALFGPNAPVTPDKRSSGNIFRYKTETRHNMHALSPFLVHDDVRPDTNYNYTPVVKPHRKVPKSPFKVLDAPALQDDFYLNLVDWSSHNVLAVGLGSCVYLWNASSSKVTRLCDLGIDDYVCSVEWAHRGTYIAVGTSKGKVKIWDASQCKTIRTMDGHRLRVGALAWSSSILSSGGRDKSIYQRDIRVKEDFISKMSGHKSEVCGLKWSYDNRELASGGNDNRLLVWNNHSTQPVLKYCEHTAAVKAIAWSPHVNGLLASGGGTADRCIRFWNTTTNSHLNCVDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWKYPSMSKVATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSQKSQNAETEIGAFSFGRTTIR* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0880 460 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 273 305 - -
Lan18g0880 460 MobiDBLite consensus disorder prediction 1 25 - -
Lan18g0880 460 Pfam WD domain, G-beta repeat 399 435 IPR001680 GO:0005515
Lan18g0880 460 Pfam WD domain, G-beta repeat 310 350 IPR001680 GO:0005515
Lan18g0880 460 Pfam WD domain, G-beta repeat 271 305 IPR001680 GO:0005515
Lan18g0880 460 SUPERFAMILY WD40 repeat-like 121 436 IPR036322 GO:0005515
Lan18g0880 460 Pfam Anaphase-promoting complex subunit 4 WD40 domain 192 246 IPR024977 -
Lan18g0880 460 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 403 436 - -
Lan18g0880 460 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 7 460 IPR033010 GO:0010997|GO:0097027|GO:1904668
Lan18g0880 460 PANTHER PROTEIN FIZZY-RELATED 1 7 460 - -
Lan18g0880 460 ProSiteProfiles Trp-Asp (WD) repeats profile. 197 231 IPR001680 GO:0005515
Lan18g0880 460 ProSitePatterns Trp-Asp (WD) repeats signature. 422 436 IPR019775 -
Lan18g0880 460 ProSiteProfiles Trp-Asp (WD) repeats profile. 403 444 IPR001680 GO:0005515
Lan18g0880 460 Gene3D - 131 439 IPR015943 GO:0005515
Lan18g0880 460 ProSiteProfiles Trp-Asp (WD) repeats profile. 273 314 IPR001680 GO:0005515
Lan18g0880 460 SMART WD40_4 182 222 IPR001680 GO:0005515
Lan18g0880 460 SMART WD40_4 266 305 IPR001680 GO:0005515
Lan18g0880 460 SMART WD40_4 138 179 IPR001680 GO:0005515
Lan18g0880 460 SMART WD40_4 396 435 IPR001680 GO:0005515
Lan18g0880 460 SMART WD40_4 308 350 IPR001680 GO:0005515
Lan18g0880 460 SMART WD40_4 225 262 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0880 Lan-Chr18 14120447 14125559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0880 270 436 Miscellaneous Gene Families AT5G08390 22.024 7.35e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0880 K03364 - gmx:100780928 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0880 18 14120447 14125559 Lan18g0880 18 14120447 14125559 ECH