Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0875 ATGGCCATGATGAAAGGTTCCAAGCGTTTGGCTGCGTCAGAACCCAACCAACCCGATTCAAATGAAACGCAGTTCCGGAATAAAAGTATAACGGAAGGCTCTCTCTTTGATTTTCGTAGGGCAGAACCATCCCAACAACCAATGGTGGTGACACCTCCATTGGATATGAAACGGGCTGAGTCATCACAGCAGCATGTGAGAGCCTTAAATACCCAGTTTGCAAGCTGGGTTCAAACAAAACTAAAGAATAATCCTGATGAGCTTTGGGAGGATGGTATCAGAGATTACTTAGATCATGCTTCAAGTATTATGGCAAAATTTAGTGATGTTGTAAACTGGCTCAAAGCAAATGCCAACAAGGGAGAAAATTTGGTTGCTGGTGATGGTGCTTCTTTTGCTGGTAAAAAAATCTTGCCCGAAGTAACAAACAAAGAAAATAACAGTTTTGGAGAAAAACCTGGGTCTACGCCTGTTAGTACTGCTACAAATTTTGCTAGTTCCTGGAGCCCTGGATTATTGTCGAACAGTCAAAACCTTTTTACATTTGGAAATCAGAGTTCAGCTCCCTCTAACCATGATGTTTCAGATGATGTAGATGGTGAAAATGAGTTGGAGCGGCCTAGCAGCCCATCAGTGAAGAAGTCGGAAGAGAAAGGTATAGTGGTTGTATATGAAGTGAAGTGCAAGCTTTATGTCAAGTCAAGTGATCCAGCAGATAAGGATGCATGGAAAGATAAAGGAATGGGCCAACTGTCTGTTAAATGCAAAGAGGGTGTCACCAAGGCTACCAAAGAATCAAAACCTACAATCATTGTTCGCAACGAGGCAGGAAAAATTCTTCTCAATGCTTTACTGTATCCAGGAATCAAGACAAATCTGCAGAAGAACTCTGTTGTTGCAATATTCCATACTTCGGGTAATGCTGATGGAAGTGGAGATAATGATAGTGTTGTTGCACGTACGTTCTTGATCCGAATGAAAACAGAAGAAGATCGAAATAAACTGGCATCAACTATCCAAGAGTATGCTCCAGTATCTTGA 1041 0.4159 MAMMKGSKRLAASEPNQPDSNETQFRNKSITEGSLFDFRRAEPSQQPMVVTPPLDMKRAESSQQHVRALNTQFASWVQTKLKNNPDELWEDGIRDYLDHASSIMAKFSDVVNWLKANANKGENLVAGDGASFAGKKILPEVTNKENNSFGEKPGSTPVSTATNFASSWSPGLLSNSQNLFTFGNQSSAPSNHDVSDDVDGENELERPSSPSVKKSEEKGIVVVYEVKCKLYVKSSDPADKDAWKDKGMGQLSVKCKEGVTKATKESKPTIIVRNEAGKILLNALLYPGIKTNLQKNSVVAIFHTSGNADGSGDNDSVVARTFLIRMKTEEDRNKLASTIQEYAPVS* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0875 346 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP50 8 344 - -
Lan18g0875 346 MobiDBLite consensus disorder prediction 194 213 - -
Lan18g0875 346 CDD RanBD_NUP50 216 343 - -
Lan18g0875 346 ProSiteProfiles Ran binding domain type 1 profile. 214 341 IPR000156 GO:0046907
Lan18g0875 346 MobiDBLite consensus disorder prediction 13 28 - -
Lan18g0875 346 Pfam RanBP1 domain 212 341 IPR000156 GO:0046907
Lan18g0875 346 PANTHER RAN BINDING PROTEIN 8 344 IPR045255 -
Lan18g0875 346 SUPERFAMILY PH domain-like 214 343 - -
Lan18g0875 346 SMART ranbd_3 205 342 IPR000156 GO:0046907
Lan18g0875 346 MobiDBLite consensus disorder prediction 1 28 - -
Lan18g0875 346 MobiDBLite consensus disorder prediction 183 213 - -
Lan18g0875 346 Gene3D - 140 345 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0875 Lan-Chr18 14088718 14094336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0875 K14295 - gmx:100816975 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0875 18 14088718 14094336 Lan18g0875 18 14088718 14094336 ECH