Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0859 CCCTCCAATTCCAATTTGAATTCACAAAAAACCAGTTACTCCAGTGGCTCCCCTACAACGGTTTCTACGATCTTGTCTAAGAATTCTGCTTTGGCTTCTCGTGGTGGTTTTGGTAAAGTGCCACATGCTGCTGCTGCTTCTTCTGGTTTGTTCAATGCAGAGAAAGAACCAGTGAAAAATGCAGAATTGTTCACACGAGATGACAGTTATGTTAAGAAGACCAAGTCCACATTATACTCCAAGGGTTATGGAATTCAACCCAGTATCCAATCAAAACCACGGATATTAGATTCATCACTAAAATCCACAACTACTGAAGGTCAAGTTGGTGATAAGTTGAGTTTGATCAAACTTGCTAGCTTAATTGAAGTTTCTGCAAAGAAAGGTACTAGTGATCTCAAACTCCAGAACAAATTGATGGACCAAGTTGATTGGCTGCCTGATTCGATAGGGAAGTTGTCGAGTTTGGTTACCCTTGATTTATCCGAGAATCGGATTACGGCCCTACCTTCCACAATTGGAGGCCTTTCATCCTTGACCAGATTGGATTTGCATGCCAATAGGATCACAGAGCTCCCTGATTCTATTGGGAATGTGCTTAGTCTAGTCTATCTAGATCTGCGGGGGAATCAGTTATCATCTCTGCCTACTTCTTTTGGCAGATTGGTACGCCTTGAGGAACTTGATTTGAGTTCAAATCAGCTTTCGGTGCTTCCTGATACTATAGGATCACTTGTTAGTCTAAAAATATTGAATGTGGAAACAAATGATATTGAAGAAATTCCGCATTCTATTGGTAATTGTTCTTCCCTTAGAGAGCTTCATGCTGACTATAATCGGCTTAAAGCCCTACCAGAAGCTATAGGGAAGATTCAAAGCCTGGAGGTTTTGTCCATGCGGTACAATAACATTAAACAACTGCCGACGACAATGTCATCTCTAATAAACCTGAAGGAACTTGATGTGAGTTTCAATGAGCTTGAGTCATTGCCCGAAAGCTTATGTTTTGTTACATCTCTTATCAAGTTGGTCATAGGAAACAATTTCGCTGACATGCGATCATTACCAAGATCCATTGGGAACCTCGAAATGCTTGAGGAATTGGATATCAGCAATAATCAGATACATGTTCTTCCTGACTCATTCGGGATGCTGACTCGACTACATGTCCTACGAGTGGAAGAGAATCCTCTTGAAGTTCCACCAAGACATATAGCTGAAAAGGGAGCACGGGCTGTTGTCCAATACATGACTGAGTTGGTGGAGAGGGAGAAGAAGAATGTTAAACCTCAGCCACTAAAGCAGAAAAAGAGTTGGGCTCAGATTTGCTTCTTTTCAAAACTCTATCAAAAGAAAGGGTGTTGGAGGAGTTGA 1374 0.4141 PSNSNLNSQKTSYSSGSPTTVSTILSKNSALASRGGFGKVPHAAAASSGLFNAEKEPVKNAELFTRDDSYVKKTKSTLYSKGYGIQPSIQSKPRILDSSLKSTTTEGQVGDKLSLIKLASLIEVSAKKGTSDLKLQNKLMDQVDWLPDSIGKLSSLVTLDLSENRITALPSTIGGLSSLTRLDLHANRITELPDSIGNVLSLVYLDLRGNQLSSLPTSFGRLVRLEELDLSSNQLSVLPDTIGSLVSLKILNVETNDIEEIPHSIGNCSSLRELHADYNRLKALPEAIGKIQSLEVLSMRYNNIKQLPTTMSSLINLKELDVSFNELESLPESLCFVTSLIKLVIGNNFADMRSLPRSIGNLEMLEELDISNNQIHVLPDSFGMLTRLHVLRVEENPLEVPPRHIAEKGARAVVQYMTELVEREKKNVKPQPLKQKKSWAQICFFSKLYQKKGCWRS* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0859 457 ProSiteProfiles Leucine-rich repeat profile. 316 337 IPR001611 GO:0005515
Lan18g0859 457 Gene3D Ribonuclease Inhibitor 215 304 IPR032675 -
Lan18g0859 457 Gene3D Ribonuclease Inhibitor 305 420 IPR032675 -
Lan18g0859 457 ProSiteProfiles Leucine-rich repeat profile. 178 199 IPR001611 GO:0005515
Lan18g0859 457 ProSiteProfiles Leucine-rich repeat profile. 155 176 IPR001611 GO:0005515
Lan18g0859 457 ProSiteProfiles Leucine-rich repeat profile. 224 245 IPR001611 GO:0005515
Lan18g0859 457 SMART LRR_sd22_2 153 178 - -
Lan18g0859 457 SMART LRR_sd22_2 222 255 - -
Lan18g0859 457 SMART LRR_sd22_2 314 332 - -
Lan18g0859 457 SMART LRR_sd22_2 199 217 - -
Lan18g0859 457 SMART LRR_sd22_2 362 382 - -
Lan18g0859 457 Gene3D Ribonuclease Inhibitor 112 214 IPR032675 -
Lan18g0859 457 SUPERFAMILY L domain-like 141 402 - -
Lan18g0859 457 PRINTS Leucine-rich repeat signature 156 169 - -
Lan18g0859 457 PRINTS Leucine-rich repeat signature 222 235 - -
Lan18g0859 457 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 4 72 452 - -
Lan18g0859 457 SMART LRR_typ_2 269 290 IPR003591 -
Lan18g0859 457 SMART LRR_typ_2 222 244 IPR003591 -
Lan18g0859 457 SMART LRR_typ_2 291 313 IPR003591 -
Lan18g0859 457 SMART LRR_typ_2 176 198 IPR003591 -
Lan18g0859 457 SMART LRR_typ_2 199 221 IPR003591 -
Lan18g0859 457 SMART LRR_typ_2 245 268 IPR003591 -
Lan18g0859 457 SMART LRR_typ_2 153 175 IPR003591 -
Lan18g0859 457 SMART LRR_typ_2 362 384 IPR003591 -
Lan18g0859 457 SMART LRR_typ_2 385 408 IPR003591 -
Lan18g0859 457 SMART LRR_typ_2 314 337 IPR003591 -
Lan18g0859 457 Pfam Leucine rich repeat 178 235 IPR001611 GO:0005515
Lan18g0859 457 Pfam Leucine rich repeat 316 375 IPR001611 GO:0005515
Lan18g0859 457 ProSiteProfiles Leucine-rich repeat profile. 364 385 IPR001611 GO:0005515
Lan18g0859 457 SMART LRR_bac_2 314 333 - -
Lan18g0859 457 SMART LRR_bac_2 268 287 - -
Lan18g0859 457 SMART LRR_bac_2 291 310 - -
Lan18g0859 457 SMART LRR_bac_2 153 172 - -
Lan18g0859 457 SMART LRR_bac_2 199 218 - -
Lan18g0859 457 SMART LRR_bac_2 222 241 - -
Lan18g0859 457 SMART LRR_bac_2 245 264 - -
Lan18g0859 457 SMART LRR_bac_2 176 195 - -
Lan18g0859 457 SMART LRR_bac_2 362 381 - -
Lan18g0859 457 ProSiteProfiles Leucine-rich repeat profile. 201 222 IPR001611 GO:0005515
Lan18g0859 457 PANTHER LEUCINE-RICH REPEAT-CONTAINING 72 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0859 Lan-Chr18 13975914 13978092 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0859 227 398 Receptor kinase-like Gene Family AT3G11080 36.464 3.27e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0859 - - lang:109332572 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0859 18 13975914 13978092 Lan18g0859 18 13975914 13978092 ECH