Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0849 ATGGTTCCCAAACCCATCATAGTAACAGCACCACCTGCATCATCTCCACCTCTCCCTCTTAAAACTATTGAAACTCCCCAACAAAACCTGAAACCAACAACACTCACAAAAACCAAACCATCTGAACAACCAATCCTCATAAAAAGAACCTCACCACAAGTCTCAGTGGTTGGACTAATCTTCAACACATTTGATCACATAATTAACAACTTCATAGACCCTCCAGTGAAACCTTCACTAGACCCAAAACACGTTCTCTCCAATAACTTCGCCCCTGTAACAAATGAACTCCCTCCAACAGAATGTGAAATCATACACGGCACACTACCACCGTGTCTCGACGGCGCGTACATCAGAAACGGCCCAAACCCACAGTTCCTCCCAAAAGGACCATACCATCTCTTCGACGGTGACGGAATGCTTCACTGCCTCAAAATCTCACAATCCAAAGCCACACTATGCAGCCGTTACGTGAAAACCTACAAATACAACATAGAAAACGAAGCTGGTCACCCTCTTATACCTAACGTTTTCTCAGGCTTCAATTCTCTTGTTGGATCAGCAGCACGTGGTTCTCTCACTGCAGCACGTGTGATTACGGGTCAATATAACCCTTCAAATGGCATTGGGTCAGCGAACACGAATTTAGCTTTGTTTGGGAATAATCTGTTCGCGTTAGGGGAATCTGACCTTCCTTATAAGGTCAGGGTGACCTCTAATGGGGACATTGAAACCCTTTCACGCCATGATTTCGATGGGAAGCTTGGTATGAATATGACTGCACATCCAAAGAGTGATCCTGAAACGGGTGAAACGTTTGCGTTTCGTTATGGACCAGTGCCTCCGTTTCTTACTTACTTTTATTTTGATTCTGAAGGGAGAAAGAAACCTGATGTGGCTATATTCTCCATGACAAGACCTTCATTTCTTCATGATTTTGCAATTACTAAAAATTATGCTATCTTTGCAGACATTCAGATCGGAATGAACCCTCTTAATATGATTTCCGGTGGATCTCCGATCGGGTCGGATCCTTCCAAAATCACTAGATTGGGATTCCTTCCACGCTATGCAACAGATGAGTCCAAAATTAAGTGGATCAACGTGCCAGGGTTCAACATAATTCATGCCATAAACGCATGGGAAGAAGATGATGGAAAAACAATAACTTTGGTAGCACCCAATATTCTCTCAGTAGAACACACACTTGAGAGAATGGAACTCATCCACGCCATGGTAGAAAAGGTGAAGATTAACCTCGACACTGGAATAGTTACAAGACAACCTCTTTCTGCAAGAAACCTCGACTTTGGTGTAATAAACCCATCCTATACCGGAAAAAAGAACCAGTTCATTTACGCGGCGGTTGGGGACCCAATGATTAAGATTACCGGGGTGGTGAAGCTTGACGTGTCGAAAGGAGAGGTTGGGTGTAGAATGTACGGCGAGGGTTGTTACGGTGGTGAACCATTTTTTGTGGCTAAGGATGAGGGTGAAGAAGATGATGGGTATTTGGTGTCTTATGTTCATGATGAGAAGAAAGGGGAATCGAAGTTTTTAGTGATGGATGCGAAGTCGCCGGAGCTTGAAGTTGTGGCGGCGGTGAAGCTTCCGAGGAGGGTGCCTTACGGTTTTCATGGATTATTTGTGAGGGACAGTGACCTGAGAAGGGTATCACTGTCATGA 1686 0.4437 MVPKPIIVTAPPASSPPLPLKTIETPQQNLKPTTLTKTKPSEQPILIKRTSPQVSVVGLIFNTFDHIINNFIDPPVKPSLDPKHVLSNNFAPVTNELPPTECEIIHGTLPPCLDGAYIRNGPNPQFLPKGPYHLFDGDGMLHCLKISQSKATLCSRYVKTYKYNIENEAGHPLIPNVFSGFNSLVGSAARGSLTAARVITGQYNPSNGIGSANTNLALFGNNLFALGESDLPYKVRVTSNGDIETLSRHDFDGKLGMNMTAHPKSDPETGETFAFRYGPVPPFLTYFYFDSEGRKKPDVAIFSMTRPSFLHDFAITKNYAIFADIQIGMNPLNMISGGSPIGSDPSKITRLGFLPRYATDESKIKWINVPGFNIIHAINAWEEDDGKTITLVAPNILSVEHTLERMELIHAMVEKVKINLDTGIVTRQPLSARNLDFGVINPSYTGKKNQFIYAAVGDPMIKITGVVKLDVSKGEVGCRMYGEGCYGGEPFFVAKDEGEEDDGYLVSYVHDEKKGESKFLVMDAKSPELEVVAAVKLPRRVPYGFHGLFVRDSDLRRVSLS* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0849 561 Pfam Retinal pigment epithelial membrane protein 90 550 IPR004294 GO:0016702
Lan18g0849 561 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 4, CHLOROPLASTIC-RELATED 36 556 - -
Lan18g0849 561 PANTHER BETA-CAROTENE DIOXYGENASE 36 556 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0849 Lan-Chr18 13833679 13836332 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0849 K09840 - gmx:100777875 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0849 18 13833679 13836332 Lan18g0849 18 13833679 13836332 ECH