Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0820 ATGGGTTTGCAGGAGGAATTTGAGCTGTATGCTGTGAAAGCTAAGTCTCTGCCAGATACTACAACAAATGAAAACTTGCTTATCATTTATGGATTGTACAAGCAAGCCACTGTTGGACCTATAGACACCAGTCGTCCCGGAATATTCAACCAGAGGGACAGAGCTAAATGGGATGCATGGAAGGCTGTTGAAGGGAAATCCAAGGAGGAAGCGATGAATGATTATGTTACTAAGGTGAAACAGCTGCTGGAAGAAGCCGGTATTGCTGTTTGA 273 0.4396 MGLQEEFELYAVKAKSLPDTTTNENLLIIYGLYKQATVGPIDTSRPGIFNQRDRAKWDAWKAVEGKSKEEAMNDYVTKVKQLLEEAGIAV* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0820 90 PANTHER ACYL-COA-BINDING PROTEIN-LIKE 1 86 - -
Lan18g0820 90 Gene3D - 1 89 IPR014352 -
Lan18g0820 90 Pfam Acyl CoA binding protein 4 79 IPR000582 GO:0000062
Lan18g0820 90 PRINTS Acyl-coA-binding protein signature 4 19 IPR000582 GO:0000062
Lan18g0820 90 PRINTS Acyl-coA-binding protein signature 21 39 IPR000582 GO:0000062
Lan18g0820 90 PRINTS Acyl-coA-binding protein signature 44 59 IPR000582 GO:0000062
Lan18g0820 90 PRINTS Acyl-coA-binding protein signature 65 82 IPR000582 GO:0000062
Lan18g0820 90 SUPERFAMILY Acyl-CoA binding protein 3 85 IPR035984 GO:0000062
Lan18g0820 90 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 1 86 - -
Lan18g0820 90 ProSitePatterns Acyl-CoA-binding (ACB) domain signature. 21 39 IPR022408 -
Lan18g0820 90 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 3 88 IPR000582 GO:0000062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0820 Lan-Chr18 13583889 13585449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0820 1 87 Acyl Lipid Metabolism Gene Families AT1G31812 70.115 5.38e-43 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0820 K08762 - mnt:21405519 157.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0820 18 13583889 13585449 Lan18g0820 18 13583889 13585449 ECH
Lan18g0820 18 13583889 13585449 Lan6g0438 6 3679299 3681377 LSH