Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0270 ATGGCTTGCCACAGCAATTTCTCTTGCTCTGCTTTTTCCTCTTTCCTCATCACCAACAACACCAATCACCATCCCTTCTCAGAATTCAAATTCAATTCTCCCACTTCCAATACGTCTTCTTCTTCATCTTCATCGTCACGGTCGTATACCCGTCGATGGTTCAATCCCCTGCGCCGTCGAAACTCCGATAACTCATCCGAAATCCAACGCCATTGGATTGAAGCCCCCAATCAATCCCATGCTTCTCCAGAAAGATTCACTGTGGCCTCATATAATATACTTGCAGATAGGAATGCAAAACAACACTCTGATTTGTATATAAATGTTCCTTCTCGTTATATTAGTTGGGATCATCGTAAGACTGTTATTTCTAACGAACTCTTTGGATGGGACCCTGATATTCTCTGTTTACAAGAGGTGGATAAGTATGTTGAACTCTCGGATATTTTGGTTAAAGCAGGATATACTGGAACTTATAAGAGGCGCACTGGAGATACAGCTGATGGTTGTGCAATGTTTTGGAAAGCTGATAAGTTCCGGTTATTAGAAGAAGAGGGCATTCAATTTAAGGACTTTGGCCTTTCTGATAATGTTGCTCAACTTTTAGTTTTTGAGATGTGTGAATCTGAATCAAGAAGACTGATAGTTGGTAACATTCACGTACTTTATAACCCAAACAGGGGAGAAGTTAAATTAGGTCAAATTCGTTTTCTCTTGTCAAGAGCACAGGCCCTCTCAGATAAATGGGGTAGTGCCCCTATTGTGCTTGCTGGTGATTTTAATACTACTCCTCAGAGTGGAATATACAAGTTCTTGTCATCTTCTGAGCTTAATATCTTGTTATATGACAGAAAGGAATTATCTGGACAGAAAAGTTGCCGTCCTGCTCAGGTTTTAGGCGAGGAAAAAGAAACACTTCGTCCATTTATCTTACCAGATGGATTGTTGAAGTGCTGGACAGATGAAGAGGTTAAAGTTGCAACTGGTGATTCTAAGCGTTATTTGGCTGTGCATTCATTGAAGCTGAATAGCTCTTATGCCACACTTAATGGTTCAACTAGTACAATGAGATTCAGTGGCGAACCCTTAGCAACTTCCTATCACTCAAAGTTCCTCGGTACTGTAGATTACTTATGGTATTCTGAAGGTATTGTGCCAACAAGAGTTCTTGATACTGTTCCTATTGCTGAGCTCGTAAGAACAGGTGGCCTACCATGCAAGAGAGTGGGAAGCGACCACTTGGCTTTGGTTTGTGAATTTTCATTCTCAGTTACCAAGACCGAATCTACCGAAATGGTTGCGGCTGCAGCATCACCTAGACTCCATATTGAAGACTAG 1338 0.4133 MACHSNFSCSAFSSFLITNNTNHHPFSEFKFNSPTSNTSSSSSSSSRSYTRRWFNPLRRRNSDNSSEIQRHWIEAPNQSHASPERFTVASYNILADRNAKQHSDLYINVPSRYISWDHRKTVISNELFGWDPDILCLQEVDKYVELSDILVKAGYTGTYKRRTGDTADGCAMFWKADKFRLLEEEGIQFKDFGLSDNVAQLLVFEMCESESRRLIVGNIHVLYNPNRGEVKLGQIRFLLSRAQALSDKWGSAPIVLAGDFNTTPQSGIYKFLSSSELNILLYDRKELSGQKSCRPAQVLGEEKETLRPFILPDGLLKCWTDEEVKVATGDSKRYLAVHSLKLNSSYATLNGSTSTMRFSGEPLATSYHSKFLGTVDYLWYSEGIVPTRVLDTVPIAELVRTGGLPCKRVGSDHLALVCEFSFSVTKTESTEMVAAAASPRLHIED* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0270 445 Pfam Endonuclease/Exonuclease/phosphatase family 89 413 IPR005135 GO:0003824
Lan18g0270 445 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 3 32 424 - -
Lan18g0270 445 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 32 424 - -
Lan18g0270 445 SUPERFAMILY DNase I-like 69 425 IPR036691 -
Lan18g0270 445 Gene3D Endonuclease/exonuclease/phosphatase 59 438 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0270 Lan-Chr18 3942652 3948879 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0270 86 274 EF-hand Containing Proteins AT5G54130 27.941 3.87e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0270 - - aip:107630317 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0270 18 3942652 3948879 Lan18g0270 18 3942652 3948879 ECH
Lan18g0270 18 3942652 3948879 Lan6g2253 6 32760546 32766414 LSH