Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0118 ATGGCAGTTTCAGAGAAGAAGAAGCTTCACCTTCTTCTCTTTGTATTCATAATTCTCACAGTACTTTTCTTCGACAAAACCCTCTCCATAAGGTTCCCAGATCGAGTTCATGAAACTTCTCGCGACAAATCAGACTCACAACAACGATTCAAGGTAGCCGTTTTCGCTCTCGGCAGTTTCTGGCGATCGGAAGCGGTGTTTGGATGCATTCCCGGAGTTATTCGAACCACCGCTGGATATTCCGGTGGATCTAAGCTTAATCCTGAATATAGAAGTTTGGCTGATCACGCTGAATCTGTTCAGGTTGAGTATGATCCAGGGATGATTAGTTTTAGGGAGCTCTTGGATGTCTTTTGGTCAAGCCATGATCCGAGGCAAGTATATGGCCAAGGTCCTGATGTGGGTAATCAGTACAGATCTATTATTTTTGTTAATGGAACTGAAGAATCAAGAATGGCTGCTGTCAGCAAAGAACTGGAACAAACCAGGTCAAGAAGCAGCATTGTGACTACTCAAATTCTACAACTTGGAATGTTCTATCCCGCAGAGCCAGAGCACCAGAAATTTGAACTGAAGCAAAATACCTTCCTTATTCAGCTAATTGGAAACCTGCCTCAGGAGGAGCTTGAGAGATCAAGCCTAGCAACAAAATTGAATGGATATGTTGCTGAACTTTGTCCTTCAAATATCCAAAAGCAAATTGATGCAAAGATCAATGAGATTATTAAAAAGGGTTGGCCCATTTTGAGGGAATTGTAG 759 0.4229 MAVSEKKKLHLLLFVFIILTVLFFDKTLSIRFPDRVHETSRDKSDSQQRFKVAVFALGSFWRSEAVFGCIPGVIRTTAGYSGGSKLNPEYRSLADHAESVQVEYDPGMISFRELLDVFWSSHDPRQVYGQGPDVGNQYRSIIFVNGTEESRMAAVSKELEQTRSRSSIVTTQILQLGMFYPAEPEHQKFELKQNTFLIQLIGNLPQEELERSSLATKLNGYVAELCPSNIQKQIDAKINEIIKKGWPILREL* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0118 252 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 51 192 IPR002569 GO:0008113
Lan18g0118 252 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 50 204 IPR002569 GO:0008113
Lan18g0118 252 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 12 251 - -
Lan18g0118 252 SUPERFAMILY Peptide methionine sulfoxide reductase 35 194 IPR036509 GO:0008113
Lan18g0118 252 Gene3D Peptide methionine sulphoxide reductase MsrA 44 246 IPR036509 GO:0008113
Lan18g0118 252 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE A5 12 251 - -
Lan18g0118 252 Pfam Peptide methionine sulfoxide reductase 53 193 IPR002569 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0118 Lan-Chr18 934833 938294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0118 K07304 - gmx:100782739 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1483 6 21679073 21680531 Lan18g0118 18 934833 938294 LSH