Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0489 ATGATGATGTTAAGCCGCAGTGTTAACGCCAAGGTATCCAACACTTCAATAATGATGGTGGCTACCCGTTTCTTCTTCACCGTGGAGGCTGGAGACACGGTGGTATTTGCTGCAGCGAAGGGTGGTTTATGTTTTGGTGCTCCAAACAAGTTGGGTCATTGGGTTAGAGCCCCTACTACAGTTCATGGTGTTAGTGTTGTAAGAAATGGAAGCACTTTGGCTATGTCAGAGAAAGAGAATAAGAATGATGATGTTGGTTCATCTTTTGAGAGTGTTGGTGGGAACAAAGAGGAGAATAAGGTTGTGAGTTATTGGGGTGTTCAACCACCTAAGGTTACAAAACCTGATGGCACAGAATGGAAGTGGAAATGTTTCAGGCCATGGGAGAGTTACAAGGCAGATCTTTCCATTGATCTGAAGAAGCACCATGCGCCTGTGACTTTTCTTGACAAGATGGCTTATTGGACTGTCAAGGTTCTTAGATACCCCACTGATATCTTTTTCCAGAGAAGATATGGATGCCGAGCAATGATGCTTGAGACTGTAGCAGCTGTTCCTGGCATGGTAGGAGGCATGTTACTCCACTTCAAATCGCTGAGACGATTTGAGCAAAGTGGTGGTTGGATCAAGGCTCTGCTAGAAGAAGCAGAGAATGAACGCATGCACCTAATGACTTTCATGGAAGTGGCCAAGCCAAAGTGGTATGAGCGTGCTCTAGTCATATCAGTCCAAGGAGTTTTCTTCAATGCATACTTTTTGGGATATTTGCTCTCACCAAAGTTTGCACACCGAATGGTTGGGTACCTTGAGGAGGAAGCAATACATTCCTACACTGAATTCCTCAAGGAGCTTGACAAGGGCACCATAGAAAATGTACCAGCTCCAGCCATTGCTATTGATTATTGGCAGCTGCCACCAAACTCAACTTTGAGGGATGTTGTCATGGTTGTGAGAGCTGACGAAGCACATCACCGCGACGTTAATCACTTCGCATCGGACATACACTATCAAGGACGCGAGCTAAGAGAGGCTGCTGCTCCAATTGGTTATCACTAG 1056 0.4555 MMMLSRSVNAKVSNTSIMMVATRFFFTVEAGDTVVFAAAKGGLCFGAPNKLGHWVRAPTTVHGVSVVRNGSTLAMSEKENKNDDVGSSFESVGGNKEENKVVSYWGVQPPKVTKPDGTEWKWKCFRPWESYKADLSIDLKKHHAPVTFLDKMAYWTVKVLRYPTDIFFQRRYGCRAMMLETVAAVPGMVGGMLLHFKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVISVQGVFFNAYFLGYLLSPKFAHRMVGYLEEEAIHSYTEFLKELDKGTIENVPAPAIAIDYWQLPPNSTLRDVVMVVRADEAHHRDVNHFASDIHYQGRELREAAAPIGYH* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0489 351 CDD AOX 168 335 IPR002680 GO:0009916
Lan17g0489 351 Pfam Alternative oxidase 141 331 IPR002680 GO:0009916
Lan17g0489 351 Gene3D Alternative oxidase 99 347 IPR038659 -
Lan17g0489 351 PANTHER UBIQUINOL OXIDASE 62 351 - -
Lan17g0489 351 PANTHER ALTERNATIVE OXIDASE 62 351 IPR002680 GO:0009916
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0489 Lan-Chr17 3765013 3767818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0489 2 351 Miscellaneous Gene Families AT3G22370 69.444 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0489 K17893 - gmx:547924 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0489 17 3765013 3767818 Lan18g0824 18 13618181 13620635 LSH