Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0477 ATGGAAAGTTCACCTAGATGCAAATTTTCAGCTATATTCTCAATCATAATCTCCTTCTTACTTGGTTTAGTTTCCTTCATATTGTGTATAGCCTCAGAGATTAAGAAGAACAAGAAGAATGATCTGAGATGGAATGGAGAACTATGTTATTTGCCATCAAGCCAAGCATTTGGATTGGGAATTGCAGCACTGGTTTGTTTATTTTTGGCACAGATCATTGGAAATTGTATATTATTCAAGAATTCTTGTTCAAGGGGGGAAAGAAACTACCAGTTTAAGATGCCTGTCATTGGAAAGGTTCTACTTTTGATCTCTTGGCTTAGCTTTGGAATTGCAATTATTTTGTTAATAACAGCCACAAGCATGAACAAAAGGCAGCCGTATGGGGTAGGATGGTTGAATGGTGAGTGCTACCTAGTCAAAAGTGGGACTTATGCAGGCTCAGCCATATTGGTTCTAGCTATAGTGGGTTCAGTAATTGGTTCAACTTTGTCAACAATAAAGACTAATCAAGAAGACCATGGTTGCAAAATATATAAAAGGGGTGACACAATTTAG 558 0.3728 MESSPRCKFSAIFSIIISFLLGLVSFILCIASEIKKNKKNDLRWNGELCYLPSSQAFGLGIAALVCLFLAQIIGNCILFKNSCSRGERNYQFKMPVIGKVLLLISWLSFGIAIILLITATSMNKRQPYGVGWLNGECYLVKSGTYAGSAILVLAIVGSVIGSTLSTIKTNQEDHGCKIYKRGDTI* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0477 185 Pfam Protein of unknown function (DUF1218) 63 155 IPR009606 -
Lan17g0477 185 PANTHER OS07G0462200 PROTEIN-RELATED 6 178 - -
Lan17g0477 185 PANTHER PROTEIN MODIFYING WALL LIGNIN-1 6 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0477 Lan-Chr17 3669582 3671410 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0477 - - gmx:100500694 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0477 17 3669582 3671410 Lan18g0842 18 13778511 13780748 LSH
Lan17g0477 17 3669582 3671410 Lan6g0381 6 3082709 3085036 LSH