Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0401 ATGAACAACACCCATGCTGCAATAAACAACTTGACCAATTTCTCTAGAAGATATTTCCACTCCCTGACCCAAACACCCCACAGGCTTAGGAAGAGAATGCTAGCCACATGGACCCCAGACCAGGAACTTAACCAAGTGAGGCAAAGGTCAGGTGCAGACATGAAGAGGAAGCTGAATTGGTATGATCTTGTAGCTCTTGGAATAGGAGGGATGCTTGGTGTTGGAGTCTTTGTCACAACTGGTTCTGTTGCTCATCATCACTCTGGTCCTTCAGTTTTCATATCTTATATCATAGCTGGAATATCAGCCCTTCTCTCCTCTCTTTGTTACACTGAATTTGCTGTTCAAATCCCAGTTGCTGGAGGAGCTTTCAGTTATTTAAGATTAACCTTTGGAGAGTTCGTGGGATATTTTGCTGGGGCAAATATACTAATGGAGTATGTGTTCTCAAACGCTGCAGTATCAAGGAGTTTTACTGAATATTTGAGCTTTGCATTTGGAGAAAATGACCCAAATGTGTGGAGAGTGGAAGTGCATGGATTGCCAGAGGAATATAACATGTTGGATTTCCCAGCTGTGGCTCTTATCCTCCTTCTCACTCTCTGCTTATGTTATAGTACTAAGGAAAGCTCCATATTGAACCTCATCATGACAGTTTTCCATGTGATTTTCTTTGGATTTATCATTGTGACTGGTTATTGCAAAGGAAGTGCCAAAAACTTGGTTAGTCCAAAAGGAATAGCTCCTTTTGGTGTTAAAGGTGTTCTTGATGGAGCAGCTATAGTATACTTCAGCTATATAGGCTATGATTCTGCATCAACCATGGCAGAGGAGATTAGAGATCCTTCTAAGAGCTTGCCAATTGGAATTGTGGGTTCAGTTCTTATAACCACTGTGCTTTATTGCCTAATGGCTCTGTCTTTGTGTATGATGATTCCTTACAACGAGGTATCAGATAGAGCATCATTTTCTATTCCATTCCTTAAGATTGGATGGAAGTGGGCGAGTAACCTTGTGGGGGCAGGTGCAAGTTTGGGGATAGTGGCTTCTCTATTGGTTGCAATGTTAGGTCAAGCCAGATACCTTTGTGTTATAGGAAGGGCTCGACTGGTGCCATCTTGGTTAGCCAAAGTGCACCCTTCAACGGGCACCCCATTGAACGCTACACTCTTTTTGGGACTTTGCACAGCACTCATTGCGCTTTTCACCGAGCTTGACATTATAATTGAGTTGGTCAACATAGGTACACTCATGGTTTTCTACCTTGTGGCCAATGCTCTCATATACCGTCGGTATGTAGTCACTCAACATACCCCACCCTTGCACACTGTTTTGTTCCTGGTTCTCCTTTCTCTTAGTGCTCTAGGCTTCTCCATGTCTTGGAAATTCAAGCAGCAATGGTGGGGTTTGCCACTGTTTGGAGGGCTCATGATCACAGTCACCACTTTTTTCCAACACATGGTGCCTAGCCATGCCCAAGTTGCTGCTGTTTGGTCTGTGCCATTTATGCCATGGCCAGCTGCAATATCTATTTTTCTTAATGTATTTCTTATAACAACACTGAAGCTCCTTTCTTTCCAAAGGTTTGCTATATGGGCATGTATCATTACCATCTTCTATGTCATCTATGGTGTTCACTCCACTTATAAAGCAGAGGAGATAGAGATGGGTGTAAATGAAGTTAGTTCAAGCACAGCTAACTTACAAACTAAGGTAGAACTTGAACTGCTTTAG 1734 0.4273 MNNTHAAINNLTNFSRRYFHSLTQTPHRLRKRMLATWTPDQELNQVRQRSGADMKRKLNWYDLVALGIGGMLGVGVFVTTGSVAHHHSGPSVFISYIIAGISALLSSLCYTEFAVQIPVAGGAFSYLRLTFGEFVGYFAGANILMEYVFSNAAVSRSFTEYLSFAFGENDPNVWRVEVHGLPEEYNMLDFPAVALILLLTLCLCYSTKESSILNLIMTVFHVIFFGFIIVTGYCKGSAKNLVSPKGIAPFGVKGVLDGAAIVYFSYIGYDSASTMAEEIRDPSKSLPIGIVGSVLITTVLYCLMALSLCMMIPYNEVSDRASFSIPFLKIGWKWASNLVGAGASLGIVASLLVAMLGQARYLCVIGRARLVPSWLAKVHPSTGTPLNATLFLGLCTALIALFTELDIIIELVNIGTLMVFYLVANALIYRRYVVTQHTPPLHTVLFLVLLSLSALGFSMSWKFKQQWWGLPLFGGLMITVTTFFQHMVPSHAQVAAVWSVPFMPWPAAISIFLNVFLITTLKLLSFQRFAIWACIITIFYVIYGVHSTYKAEEIEMGVNEVSSSTANLQTKVELELL* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0401 577 Gene3D Amino acid/polyamine transporter I 53 491 - -
Lan17g0401 577 Pfam Amino acid permease 58 461 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lan17g0401 577 PIRSF AA_transporter 490 568 - -
Lan17g0401 577 PIRSF AA_transporter 35 490 - -
Lan17g0401 577 PANTHER CATIONIC AMINO ACID TRANSPORTER 7, CHLOROPLASTIC-LIKE 16 561 - -
Lan17g0401 577 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 16 561 - -
Lan17g0401 577 Pfam C-terminus of AA_permease 498 547 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0401 Lan-Chr17 2970259 2973061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0401 145 552 Organic Solute Cotransporters AT3G10600 49.762 2.36e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0401 - - gmx:100790787 940.258