Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0400 ATGGTAGAATTCCACGAACACATAATCACAGAGCTTCTAGAAGATTCCAATGGCGGTCTCGTCATTCTCTCTTCTGGCCTCTCACTCTCCAAACTCATATCTACTCTTCTCATTCTACACTCTTCTTCTCAAGGCACCCTTCTCATTCTCTCTTCTACTTCAACTTCTCTTAAATCCAAAATCACTTTTCACCTCAAAACCCTAAACCCCCAATTCCATCAAATTCCCGCCGAAATCACCGCCGATCTCCCCTCCAACCACCGCTATTCCCTATACACCTCCGGCAACATCTTCTTCATCACTCCACGCATCCTCATCGTTGATCTCTTAACTAACAAACTTCCAACCTCCGCAATTTCAGGAATCATCATCCTCAACGCGCATTCTCTATCCGAAACCTCTACTGAAGCATTTATTGTCCGCATTTTCAGGTCTCTTAATCGAAATGCGTACATTCGAGCGTTCTCTGATAAGCCGCATGCGATGGTTTCGGGGTTTGCGAAGGCGGAGAGGACGATGAAGTTTCTGAATGTTCGGAGGCTGCATCTATGGCCGAGGTTTCAAGTGGACGTGTCGCAGGAACTGGAGAAGGAGCCGCCGGACGTGGTGGATATAAGGGTGCCGATGACGAAGTACATGGTGGGGATTCAGAAGGGTATTGTGGAGGTTATGGATGCGTGTTTGAAGGAAATGAGGAAGACAAATAAGGTTGACGTGGAGGATCTGACGGTGGAGAATGGTTTGTTCAAGTCGTTTGATGAGATTGTGAAGAGGCAGTTGGATCCAATTTGGCATACTCTGGGTAAGAAGACTAAGCAGCTCGTGTCGGACCTTAGGACCCTGAGAAAATTGTTGGATTATCTTGTCAGGTATGATGCAGTAACTTACTTGAAATATTTGGACACACTGAGAGTGTCGGAGAGTTTTCGATCTGTTTGGATATTTGCAGAGGCGAGCTATAAGATATTTGATTATGCAAAGAAACGTGTTTATCATCTAGTGAGATCAGATGGTATGAAATTAGATGGGTTGAGTAAGAGTGCCAAAAACAAAAAGAGAAAAGTTAAAGGGGATAACAAAGACACTGAAGAAGGAGTTGATGGTGCTTCATCAACAAGTTCAAATGCTGGCTTAGTCTTGGAGGAAGTCTTGGAAGAAGCACCAAAGTGGAAGGTCTTACGTGAGGTTCTTGAGGAGGTAGAAGAAGAAAGACAAAAGCAAGGTGCATTGAGAGAAGAAGTGTTGGCTGAAGGTGAAGACAATGGCATTGTATTGGTTGCATGTAAAGATGAACGGTCGTGTTTTCAACTTGAAGAATGCATCACAAACAGTCCAAAAAAGGTCATGAGTGAAGAATGGAAGAAGTACTTGCTAAGCAAAGTACAGCTGCGTGACATAGTGCATAATAAGAAGAATAAGCCAAAGGATCCCAAAGGTTTTGGGATCCTTGATGGAGTGACCCCCACAACACCTGCTCAAAATGCAGATGCCAGCAGCATTAGTAAGCAGGAGCATGATGCACTTCTGGCAGCAGCATCGGGACTAAAAGATTTTGCTAAAAATGATCATGTTGAAGGTCCCTCTCTGCCTGATTTTGGTGGACGGGGTCGTGGAAAAGGAAAGAGAAAATTAGGGAGTAAAAATGGTCCTATCGTCGTTGATGGATCCGGAGTCCATAACGGTAATAAAGAGACATCAACAAGTGATAAATTTGGGAAATGTGATTCGAAAAATGAAGCCCACATAGATGAAGCTAGTCCTGCCAGTTCTGGTAGATTTCATGAAATCATGCATGGTGGGACATCTGTAGACAACATACTTCTTCGTAAGCATACTGATGCTGCAGCTTTAAATGCGAAGCCACTACCTCCAGTACATTTTTATGCCATAGAAAGTGATCAGCCTATATTGGACATATTAAAGCCCTCTATTATCATTGTTTACCATCCTGACATGGCTTTTGTTAGGGAAATTGAAGTCTATAAAGCTGATAACCCCTCAAAAAGATTGAAGGTATATTTTCTTTTCTATGAAGATTCTACTGAGGTTCAGAAGTTTGAGGCAAGTATACGTAGAGAAAATGGAGCATTTGAATCTTTGATCAGGCAAAAGTCTATGATGATGATTCCAGTTGACCAGAGTGGGTATTCTACTTTAGAGTCAGATTTAAATACTCCTCAAAACTCAATAACTAGAAAAGCTGGTGGGAGAAAAGAGGCTAATAAAGAAATGCAGGTCATTGTGGACATGCGGGAGTTCATGAGCAGCCTCCCCAATGTTCTACATCAAAAGGGAATGCACATCATTCCTGTGACCTTAGAAGTCGGCGACTATATCCTATCACCATTAATTTGTGTGGAAAGAAAAAGTATTCAAGATCTCTTTATGAGCTTCACTTCAGGTCGTCTGTATCACCAGGTGGAGACGATGGTGCGATATTATAGGATACCTGTACTCTTGATTGAGTTTTCACAGGACAAGAGCTTTTCATTCCAGTCTGCTAGTGATATTGGTGATGATGTGACACCAAATAGCATTATATCGAAGTTGTCTTTACTTGCCCTACACTTTCCCCGGCTAAGAATAATCTGGTCTCGGAGTTTGCATGCTACTGCTGAAATATTTGCTTCTCTGAAGGCAAATCAAGATGAACCAGACGAAACAAAAGCAATGAGAGTGGGTGTCCCCTCGGAAGAAGGGGTCGTGGAAAATGATGTGAGAGCTGAAAATTACAACACATGGGCTGTGGAGTTTCTTAGACGACTTCCAGGTGTTACAGATTCAAACTACAGGACCATAATGGATGGGTGTAAGAGCTTGGCAGATCTCGCTCTTCTTCCTATGGAAAAGCTTGCAAAATTAATGGGTGGTCATAAAGCTGCTCGGACTCTAAGAGACTTTCTTGATGCTAAATATCCAACTTTGTTATGA 2931 0.4261 MVEFHEHIITELLEDSNGGLVILSSGLSLSKLISTLLILHSSSQGTLLILSSTSTSLKSKITFHLKTLNPQFHQIPAEITADLPSNHRYSLYTSGNIFFITPRILIVDLLTNKLPTSAISGIIILNAHSLSETSTEAFIVRIFRSLNRNAYIRAFSDKPHAMVSGFAKAERTMKFLNVRRLHLWPRFQVDVSQELEKEPPDVVDIRVPMTKYMVGIQKGIVEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEIVKRQLDPIWHTLGKKTKQLVSDLRTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAEASYKIFDYAKKRVYHLVRSDGMKLDGLSKSAKNKKRKVKGDNKDTEEGVDGASSTSSNAGLVLEEVLEEAPKWKVLREVLEEVEEERQKQGALREEVLAEGEDNGIVLVACKDERSCFQLEECITNSPKKVMSEEWKKYLLSKVQLRDIVHNKKNKPKDPKGFGILDGVTPTTPAQNADASSISKQEHDALLAAASGLKDFAKNDHVEGPSLPDFGGRGRGKGKRKLGSKNGPIVVDGSGVHNGNKETSTSDKFGKCDSKNEAHIDEASPASSGRFHEIMHGGTSVDNILLRKHTDAAALNAKPLPPVHFYAIESDQPILDILKPSIIIVYHPDMAFVREIEVYKADNPSKRLKVYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSMMMIPVDQSGYSTLESDLNTPQNSITRKAGGRKEANKEMQVIVDMREFMSSLPNVLHQKGMHIIPVTLEVGDYILSPLICVERKSIQDLFMSFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPNSIISKLSLLALHFPRLRIIWSRSLHATAEIFASLKANQDEPDETKAMRVGVPSEEGVVENDVRAENYNTWAVEFLRRLPGVTDSNYRTIMDGCKSLADLALLPMEKLAKLMGGHKAARTLRDFLDAKYPTLL* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0400 976 SUPERFAMILY RuvA domain 2-like 907 971 IPR010994 -
Lan17g0400 976 MobiDBLite consensus disorder prediction 348 373 - -
Lan17g0400 976 PANTHER DNA REPAIR ENDONUCLEASE XPF 2 972 - -
Lan17g0400 976 Coils Coil 393 417 - -
Lan17g0400 976 MobiDBLite consensus disorder prediction 525 575 - -
Lan17g0400 976 Gene3D - 903 974 - -
Lan17g0400 976 SMART ERCC4_2 745 825 IPR006166 GO:0003677|GO:0004518
Lan17g0400 976 MobiDBLite consensus disorder prediction 348 365 - -
Lan17g0400 976 Gene3D - 745 891 - -
Lan17g0400 976 SUPERFAMILY Restriction endonuclease-like 742 880 IPR011335 -
Lan17g0400 976 Pfam ERCC4 domain 748 877 IPR006166 GO:0003677|GO:0004518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0400 K10848 - gmx:100812359 1554.65