Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0398 ATGGACGACTATTATTCTATATTTTCTTTTAAATTCATTTTTTTTGTAAAAATATTGATCTTGAGCTTAGAAGTCACAGCAATTAACTCCATTTTACAGTGTTGGTTGAAGAAACAAAAGGACAGCTTAGCTCCTGAAATCAAAGATGGTGAGCCGGAAGGGGAAATAGTTAGTTGGACTTCTGGTCTCATCTTTGGGAAAGGAGAGGGTATTATTCTGTTGGAAACTGAACATGGAGCTCTTCGTATTAAAGTAACTTTTCCCGACTGTGTGCCCCACTCTGTTGCCTACGTTATAGAATTGTTGACTTTGCGACATTGTCCAGGGTGCCAATTTTACCGTGCAGAGAACCGAGGTCAATCATGGGATTCAGAAGGAAACCATATAGAAAATGCTGCTTTCGGCCCCCCTTATGCCTTGATTCAAGGGATACTAGAAGCACAAGGCAACCCATTCAAGAAACTACCCATTGAAGATTGTCCAACATTAAGAAAGGGTTCAATCGCTTGGATTGGTTCTGGCCCAGAATTCTTTATTAGCCTAGCTAACCATGCAGAGTGGAAAAACATATACACTGTCTTTGGTTCTGTTCTTCCAGAAGACATGCATATTGCTGAGAAAATAGCTACACTCCCCACAGTATCTGATGTTTGGAACAATGTTAATGTGACTGTTTTAGAAAAACCAGTTCCCTTGTGGTTGAGAAGAGTCAAGAAAAACAGTGAAGATTGA 732 0.3989 MDDYYSIFSFKFIFFVKILILSLEVTAINSILQCWLKKQKDSLAPEIKDGEPEGEIVSWTSGLIFGKGEGIILLETEHGALRIKVTFPDCVPHSVAYVIELLTLRHCPGCQFYRAENRGQSWDSEGNHIENAAFGPPYALIQGILEAQGNPFKKLPIEDCPTLRKGSIAWIGSGPEFFISLANHAEWKNIYTVFGSVLPEDMHIAEKIATLPTVSDVWNNVNVTVLEKPVPLWLRRVKKNSED* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0398 243 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASES 33 240 - -
Lan17g0398 243 SUPERFAMILY Cyclophilin-like 67 226 IPR029000 -
Lan17g0398 243 Gene3D - 65 229 IPR029000 -
Lan17g0398 243 PANTHER EXPRESSED PROTEIN 33 240 - -
Lan17g0398 243 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 73 223 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0398 Lan-Chr17 2956580 2960454 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0398 - - gmx:100800178 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0398 17 2956580 2960454 Lan6g0321 6 2491287 2495459 LSH