Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan17g0382 | ATGACGGTTTCTTCAGCGAATTCCGTCGACGATAGCATCAAGAGTTCTCTCACCAAACTTGCTCCACTTGAAGCAGTGCTGTTTGATATCGATGGAACTCTTTGTGATTCTGATCCATTCCACTACCAGGCTTTCCGCGTGATGCTCCAAGAGATTGGTTTCAATGGAGGTGTTCCTATAACAGAGGAATTTTTTATTGCAACTGCTGCTGGCAAGCACAACGATGATGTTGCATTGGCTCTCTTTCCTGATGATATCGAACGAGGTTTAAAGTTTCTAGAGGATAAGGAAGCCATGTTCCGGAAATTGGCTGCAGAGCAAGTGAAGCCTTTGAGTGGTCTTGATAAAGTCAGGAAATGGATTGAAGATCGTGGGTTGAAGCGGGCTGCTGTTACCAATGCTCCAAGACCAAATGCAGAACTTCTGCTCTCAGTACTTGGTCTCTCAGATTTTTTTGAAGCTGTTATTATTGGTGATGAATGTGAACATGCCAAACCTCATCCAGATCCCTACTTGAAAGGTCTTGAAGCTCTAAAGGCATCAAAGGATCACACACTTGTATTTGAGGATTCTGTTTCAGGGATCAAGGCTGGAGTAGCCGCTGGGATGCCTGTTATAGGTTTAGCAACCCGAAACCCAGAGCATTTACTGATGGAAGCCAAACCTGCTTTTCTTATTAAGGATTATGAGGATCCAAAATTGTGGGCAGCTTTGGAAGAACTCGACAAGGCTGGTGCACATTAA | 744 | 0.4422 | MTVSSANSVDDSIKSSLTKLAPLEAVLFDIDGTLCDSDPFHYQAFRVMLQEIGFNGGVPITEEFFIATAAGKHNDDVALALFPDDIERGLKFLEDKEAMFRKLAAEQVKPLSGLDKVRKWIEDRGLKRAAVTNAPRPNAELLLSVLGLSDFFEAVIIGDECEHAKPHPDPYLKGLEALKASKDHTLVFEDSVSGIKAGVAAGMPVIGLATRNPEHLLMEAKPAFLIKDYEDPKLWAALEELDKAGAH* | 248 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan17g0382 | 247 | Gene3D | Putative phosphatase; domain 2 | 38 | 106 | IPR023198 | - | |
| Lan17g0382 | 247 | Gene3D | - | 24 | 232 | IPR023214 | - | |
| Lan17g0382 | 247 | SFLD | C1.5.6: HAD, Beta-PGM, Phosphatase Like | 23 | 231 | - | - | |
| Lan17g0382 | 247 | CDD | HAD_BPGM-like | 25 | 210 | - | - | |
| Lan17g0382 | 247 | PANTHER | 6-PHOSPHOGLUCONATE PHOSPHATASE | 7 | 244 | - | - | |
| Lan17g0382 | 247 | SFLD | Haloacid Dehalogenase | 23 | 231 | - | - | |
| Lan17g0382 | 247 | PANTHER | HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP | 7 | 244 | - | - | |
| Lan17g0382 | 247 | Pfam | Haloacid dehalogenase-like hydrolase | 26 | 207 | IPR041492 | - | |
| Lan17g0382 | 247 | SUPERFAMILY | HAD-like | 19 | 240 | IPR036412 | - | |
| Lan17g0382 | 247 | TIGRFAM | HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 | 96 | 207 | IPR006439 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan17g0382 | Lan-Chr17 | 2843076 | 2845317 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan17g0382 | - | - | cam:101496926 | 423.705 |