Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1249 ATGGAGGAGCATGAGGAGATATTGTTAAATGGCTTATTGCCCGATGAAGCTGCGACCGCATCGGTGATGCGAGTGCTTGATATGGAGCGGTGGTTGAAGGCTGAAGAAAGGACTGCGGAGCTGATTGCCTGCATTCAGCCTAATCAACCCTCTGAGGAGCGCCGCAATGCAGTTGCTGATTATGTGCAACGGCTGATCGCAAGATGCTTCCCTTGCCAGGTATTCACGTTTGGGTCTGTACCCCTCAAAACTTATTTGCCTGATGGAGATATCGACTTAACAGCATTCAGTAAGAATCAAAATATAAAGGATGCATGGGCTCATCAGGTTTGTGACATGCTCAAGAAAGAGGAAAAAGATGAGAATGCCGAGTTTCGTGTCAGAGAGGTTCAGTACATCCAGGCTGAAGTTAAGATTATAAAGTGTCTCGTTGAGAATATCGTGGTAGACATTTCATTTAACCAGCTTGGAGGATTGTGTACCCTTTGTTTTCTCGAGGAGGTCGATATTCTGATTAACCAAAACCATTTATTCAAACGAAGCATTATGCTTATAAAAGCTTGGTGTTACTATGAGAGCCGTCTACTTGGTGCCCACCACGGACTTATCTCAACTTATGCATTAGAAACCTTGGTTCTGTATATATTTCATGTTTTCAACAATTCCTTCGCTGGACCACTTGAGGTATTGTATCGGTTTCTGGAGTTTTTTAGTAAGTTTGACTGGGATAATTTTTGTGTCAGCCTGTGGGGTCCTGTGCCCATTAATTCACTCCCGGATGTGACAGCTGATCCTCCTCGGAAAGACGGTGGTGATTTACTGCTCAGCAAGTTATTTCTTGATGCCTGTAGCTCAGCTTATGCTGTTTTCCCTGGTGGGCATGAAAATCATGGGCAACCATTTGTTTCCAAGTATTTCAATGTTATTGATCCTCTGCGTGTCAACAATAACCTTGGGCGTAGCGTCGGCAAAGGAAATTTCCTTCGGATACGTAGTGCTTTTGCACTTGGCGCCAAACAGCTTGCCAGATTACTTGATTGCCCAAAAGAGGAAATGTTTTCGGAAATCAACCAGTTCTTTATGAACACTTGGAAAAGACATGGAAATGGGGAAAGGCCCGATGCTCCAAACAATGACTTGTGGCATTTGAGATTATCTAGTGGTGACCAATTACCGGGATCGGAGAATTCCCGAAACAATAGCCAAAAAATTAATAATACCTCTATTTGTAAAATTCAAGCTGAAGGGACACATTCTTTACAAAGTGGTCTATCTCACCAAAACAATGCAAGGCCTTCTGATCAGGTCGTAAGGGAAAGTACTCGTAACCAAGGTGGTAATGTTGATAAAGTTCGGAGAAATGTTAAGCTCGATAATCCATTTGGTGATGTTCCAGGAAGGTTTCTATTTGCAAGAACTCATTCTAGTCCTGAGCTGACTTGCTTATATGGTGAGGTTTCTTCTCATGGAAGGTGGACAAGAGCCCCAGAAAGTGGGAAAAACTCAAATTCCTCTGCAAAGCTTGAGAGTAATCATACGAATGTTGATTCAGACATTGCTGCAAGTAATGGTTTTAGAGTTGACGATTCATCTGCTAGGCCTAACTTATCTCATCAAGTTATTGATATTTCCACAAATTCAAACAATGGTTCAAGTAGTTATCATGATGAATCTGTCCAAGGTATCATCGGTGAAAAGTTTGCATGTATTGCAGGAGCAGCTGGAACACATATGATGAATCAGGAGGAACAGGATCTTTTGAACATGATGACATATGTCACACCTCAAGGTTTTACTGGTCATCCTAATATTCCCGTGAATTTTGCTCTAGGACACCATCTACAACTTCCGTTTTCACCTTCGGTTCTTGCATCAATGGGATATGCTCAGAGAAATATCGGTAACCTTCACTTGGTTGAGGCTCCTTGGGGTAATAATATGCAACTTCCCGATGGTTTAGTCCCTTCACCATTGAGTCCATATTTCCCTGGCATAGGATTGACCTCAAATGCTGAAGACTTAATTGAAACTGGTAATGTGAATTTCAGTCCTGTTGAACCGAGTCCGGCGGAAGCTGATAATGATATTTGGCATGAGCAAAACAGGCCTTCTTCTAGTGGGGTTGAAATTGATGATGAAAATTTTCAAGTGCTTCCTCATGATAAGCAAGAATCAACTTCAGGCGTTCATAACTTTGCCCCACCATCTCATGTTGGCAGCTCTAGTAGTTCTAGCCGACATCAGCAGACGTTTGCCAAAGATAACCAAGGTTCAATAAGAGAAGAGCGCATTGATACTTCACAATATCAAGATGGCAGAGGAAGTGATGTTTATTTCGATGACAGAGTAGCAAATTCTAGGTTGACCAGTACACTACCTTCAAGCTGCCACGGGTGTAAGACATCTTCAGAAAGCTCTTCAGAAGTATCATCAGCAAAATCCTCAAAACCGACCAGGGAAAAAGGAGGGAGGACAAATACCCCTCCTGTGCCATCTTACGGGAAGGGTAAGAATGTCTTCGAAATTTCATCAAATTCAGTGGATGATGAAAACAGAAAAGGGACATATCCAAAAACTCCGACATTGGATGTCCCGGAAAGAAGCACTGGGCTGCTTATGCATGTTCCGAGGCAGCAAGTATCTAGTTCTGAAGCAGCTCAGACAAGTGGATCAGATTCTGTGTTACCTATTGCTCCGATGCTTATAGGTCATGGTTCTCGCCAAAGAGCAATTGATAATAATTCAGGTGTTGTTCCTTTTGCATTCTGTCCTGCAGGGCCTCCAGTACCATTTTTTACGATGCTTCCATTATATAATCTTCCGACCAAGGCTTCTTCTGCTACATCACCTAGCAATTTCAATGTGGAAGAAGTGGTGGATAATGGTGATTCTCGACAGAATTTTGATGTATTCGAGATTTATGACCACCACCCTGAAGTGTTGTTAAGCCCTTCCGAATCTATGAGGAGAGCCTCTGTTGACTCATCAGAGCCTAACCCTGACATTCTTAACAGTGACATTATTAGCCATTGGCAAAATTTGCAGTTTGGGCGATTTTGTCAAAATTCACGGCATCCTCAGCCAGTCATCCATCCTTCACATGTTATGGTGCCTCCTGTGTATTTGCCGGGCCGTTTTCCTTGGGATGGTCCCGGAAGACCAGTTTTAGTTAACATGAATATTTTCACTCAACTTATGAGCCATGGGCCACGTCTAGTGCATGTTGCTCCTCTCCATCCAGTTTCTAATAGACCTGACAACATTTCCCAACATTTAGCAGATGAGATGCCACGGTATCGAAGTGGGACCGGAACCTACCTGCCAAATGCTAAGGCTTCTGTTCGGGATCTGCATTCTACAAGTTCTAGAAGAGGAAATTACAACTACGATAGAAGTGACAACCATGGTGACAGAGAAGGGAATTCAGTTACGAACTCAAAGTCACGAACAACTGGGCGTGGTCATAATCGCAGCCAAATTGACAAGTCTAGCTCAAGGCCAGAAAGGCTCGCCACAAGCGAGAGCCACACTGAAAGACCGTGGGGTTCGCATACAAACGACTCCATTATTTCTCACCAGAATCAGAACAGTCCGGTCCACCTAAATTCCATGCAAGACCGACCTGCGAATGTGGCTTACGGAATGTACTCTCTACCAGGCATGAACTACGGTGGATTGTCATCAGATGGACCAACAATTCCATCTGTCGTAATGTTATATCCTTATGATGATCATAATGCTGACTATAGTTCACCAACAGGACAGCTTGAATTTGGATCTCCGGGATCACCAATGGGTTTCTCGGGTGTACACGAACTGAACGAGGGAACTCGTTCTGTTCGAGCTTTAAAGGAGCAAAGGTTTCATCGTGGTGGTTCTTCTGAACGACCCTCACCAGATCAACCCTCTTCGCCCCATGTCCCAAGGGGACTTTAA 3936 0.436 MEEHEEILLNGLLPDEAATASVMRVLDMERWLKAEERTAELIACIQPNQPSEERRNAVADYVQRLIARCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNIKDAWAHQVCDMLKKEEKDENAEFRVREVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDILINQNHLFKRSIMLIKAWCYYESRLLGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPINSLPDVTADPPRKDGGDLLLSKLFLDACSSAYAVFPGGHENHGQPFVSKYFNVIDPLRVNNNLGRSVGKGNFLRIRSAFALGAKQLARLLDCPKEEMFSEINQFFMNTWKRHGNGERPDAPNNDLWHLRLSSGDQLPGSENSRNNSQKINNTSICKIQAEGTHSLQSGLSHQNNARPSDQVVRESTRNQGGNVDKVRRNVKLDNPFGDVPGRFLFARTHSSPELTCLYGEVSSHGRWTRAPESGKNSNSSAKLESNHTNVDSDIAASNGFRVDDSSARPNLSHQVIDISTNSNNGSSSYHDESVQGIIGEKFACIAGAAGTHMMNQEEQDLLNMMTYVTPQGFTGHPNIPVNFALGHHLQLPFSPSVLASMGYAQRNIGNLHLVEAPWGNNMQLPDGLVPSPLSPYFPGIGLTSNAEDLIETGNVNFSPVEPSPAEADNDIWHEQNRPSSSGVEIDDENFQVLPHDKQESTSGVHNFAPPSHVGSSSSSSRHQQTFAKDNQGSIREERIDTSQYQDGRGSDVYFDDRVANSRLTSTLPSSCHGCKTSSESSSEVSSAKSSKPTREKGGRTNTPPVPSYGKGKNVFEISSNSVDDENRKGTYPKTPTLDVPERSTGLLMHVPRQQVSSSEAAQTSGSDSVLPIAPMLIGHGSRQRAIDNNSGVVPFAFCPAGPPVPFFTMLPLYNLPTKASSATSPSNFNVEEVVDNGDSRQNFDVFEIYDHHPEVLLSPSESMRRASVDSSEPNPDILNSDIISHWQNLQFGRFCQNSRHPQPVIHPSHVMVPPVYLPGRFPWDGPGRPVLVNMNIFTQLMSHGPRLVHVAPLHPVSNRPDNISQHLADEMPRYRSGTGTYLPNAKASVRDLHSTSSRRGNYNYDRSDNHGDREGNSVTNSKSRTTGRGHNRSQIDKSSSRPERLATSESHTERPWGSHTNDSIISHQNQNSPVHLNSMQDRPANVAYGMYSLPGMNYGGLSSDGPTIPSVVMLYPYDDHNADYSSPTGQLEFGSPGSPMGFSGVHELNEGTRSVRALKEQRFHRGGSSERPSPDQPSSPHVPRGL* 1312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1249 1311 MobiDBLite consensus disorder prediction 1154 1175 - -
Lan16g1249 1311 MobiDBLite consensus disorder prediction 494 515 - -
Lan16g1249 1311 Gene3D Beta Polymerase, domain 2 47 156 IPR043519 -
Lan16g1249 1311 MobiDBLite consensus disorder prediction 789 865 - -
Lan16g1249 1311 SUPERFAMILY PAP/OAS1 substrate-binding domain 177 347 - -
Lan16g1249 1311 MobiDBLite consensus disorder prediction 723 777 - -
Lan16g1249 1311 MobiDBLite consensus disorder prediction 1099 1203 - -
Lan16g1249 1311 Gene3D - 157 358 - -
Lan16g1249 1311 CDD NT_PAP_TUTase 54 161 - -
Lan16g1249 1311 MobiDBLite consensus disorder prediction 1287 1311 - -
Lan16g1249 1311 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 6 1309 - -
Lan16g1249 1311 MobiDBLite consensus disorder prediction 789 813 - -
Lan16g1249 1311 MobiDBLite consensus disorder prediction 418 444 - -
Lan16g1249 1311 MobiDBLite consensus disorder prediction 756 777 - -
Lan16g1249 1311 MobiDBLite consensus disorder prediction 491 515 - -
Lan16g1249 1311 MobiDBLite consensus disorder prediction 1176 1203 - -
Lan16g1249 1311 MobiDBLite consensus disorder prediction 679 709 - -
Lan16g1249 1311 MobiDBLite consensus disorder prediction 418 454 - -
Lan16g1249 1311 SUPERFAMILY Nucleotidyltransferase 23 195 IPR043519 -
Lan16g1249 1311 MobiDBLite consensus disorder prediction 370 402 - -
Lan16g1249 1311 MobiDBLite consensus disorder prediction 723 755 - -
Lan16g1249 1311 PANTHER - 6 1309 - -
Lan16g1249 1311 MobiDBLite consensus disorder prediction 1128 1142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1249 Lan-Chr16 20500540 20507511 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1249 - - lang:109329596 2639.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g1249 16 20500540 20507511 Lan11g0658 11 5489135 5498923 PCT
Lan16g1249 16 20500540 20507511 Lan9g0978 9 16516144 16524396 PCT
Lan16g1249 16 20500540 20507511 Lan2g0746 2 15812961 15821272 PCT
Lan11g0658 11 5489135 5498923 Lan16g1249 16 20500540 20507511 PCT
Lan9g0978 9 16516144 16524396 Lan16g1249 16 20500540 20507511 PCT
Lan2g0746 2 15812961 15821272 Lan16g1249 16 20500540 20507511 PCT