Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1186 ATGATGAATAAAGTTACCTCGGAACCTGGCGGCGGTGGCGGCTTCCACGCCGTTCATGCAGAGCGTGACCTACAATCCAATTGGGAAGTTGACCTAGCCAAGAAACTAGAGGAGTATCTGCTCAAAATTAGCTCTGGTGAAATCACCGGCTATGAAGAAAACCATGATACTCTAAATTTTGCAGAAGCTGCTCTGCTGCTTCAGGGTTCCATTCAGGTGTATAGTAGGAAGGTGGAGTATCTCTACAACTTGGTATTGCGTGCTTTAGAGTTCCTTTCACATAAAAGACAGCAAGATCCTATAGATGGGGAATCAATCCAACCTGAAGAAAATGGTCCATGTGCTGTTGTCGATGAAGAAAATGATCAATTCTGGGTCTTAGATGACATCCCAGTCGATGAAAAGAATTCCTTGGAGATTTCAACAGGCAAAGAAGTGAATTTGAATCACTTTATAAAACCCCCTTCAAATTTAGTTGTTCTTGAAGGTGACTGCTTAGATTCTACCGGTGATGGTGGGGAATTGGAGTCTTATCTGCTGTCCACCACAGATTTGTACCAGGATTTTATTTTATTGGACACATCTGATGCTGTTGCAGTTGACGGGTTTGTGAAGGGAAGCAAAACTGATATAGCAAAAAACGCTGCTGAAAGAGCAACCTCAGCCCGTAAAACCTTTCTTTCTCCTACAAGATGCTCTGGGGGCAGTGCTCATAAATCATCGGATGCAAAGAGTAAGCGGGCTAATTCCAACTGTTCCCCCAAACTTAATTGCAGTTATGATGACAACAACGTCCATCCCATTTCTCCTATCTTTGCTGGTCTTGATGACTGCAACTTTGGACTTAATATGGATGATGGATTTGACCCATCGAGGGATTCAGACAATTCAGATGCCGATGATCCATGGAAACCATTGAATCCTCATGAACCAGGCAACTTGCGGGTGAAGCCTTTTAGAAAAGTGAAAACTTTAAAAAAGAATCGCATCAACATGACACGTCAAGTTTCCATGAGCATGTTGTTTCCAGTTGCAAAATTGCATGGTCCTATCAGTCCGGAGCTCATGGAAATGTGGGAGATGCGACATCATGCCCATGAATGTCAAAAGGATTCTCAATCTGCGCCACTATATGAGAAGCTGAGGCAAACTCTCACTAGTGAAACATTAAACTTTGAATCTGACAATGATGACAACGGACATGATACTGGAAATCCTGACTTTGATATGCCGGGAAATGCCTACATGGATGAAGATTTTCCTCCTTGGAATAAAGAGAATGCTCTCCTAGCTAGCATAGCTGAATCTGAGAAGCAAACTGAAATGGCTGCTAGGGTTTCAACATGGAAACAGAGAATTGAGCACCATCTGGAAGGACAGGAATCACACCCACCATTCGATATCCGCGACTATGGTGAGAGAATTCTGGACAAACTATCAGTTGAAGAAAGCAGTAACTCTGTCCTACCTTTCTCTGATCTAGTCAGTGGACAAGAAAAGTATGATGTAGCCCGAAGCTTTTCTTCTCTTCTTCAACTGGTGAACAATGGAGAAGTAAATCTCGAAAGAAATGGAGTTGATGGGGAGCCTGTGTGCTATACTTCTGTTAATCCTTTTCAAGTTAAGCTCCTTAAGCACAATAAGAAACAGGATGATGCGCAATTTCGTTTCTCGAAAAAGAGAGCGAAGTCTCCAACAAAGAAATCGGCTGCAAAAGGTGACAAGATCAAAGGTGGAAGGGAGAAGTCTCTCAATTCATCTTTACCAACAGGTTCCCCTCCATCAAGTTGCAAATTTCCTGTCAAGCTTGGAAAGGCGAGTACGGTACGGTTATCTCCCGAGACTAAGAGGAGGCGTAGATCCTTGCGATCAGCAGGGTGA 1881 0.4322 MMNKVTSEPGGGGGFHAVHAERDLQSNWEVDLAKKLEEYLLKISSGEITGYEENHDTLNFAEAALLLQGSIQVYSRKVEYLYNLVLRALEFLSHKRQQDPIDGESIQPEENGPCAVVDEENDQFWVLDDIPVDEKNSLEISTGKEVNLNHFIKPPSNLVVLEGDCLDSTGDGGELESYLLSTTDLYQDFILLDTSDAVAVDGFVKGSKTDIAKNAAERATSARKTFLSPTRCSGGSAHKSSDAKSKRANSNCSPKLNCSYDDNNVHPISPIFAGLDDCNFGLNMDDGFDPSRDSDNSDADDPWKPLNPHEPGNLRVKPFRKVKTLKKNRINMTRQVSMSMLFPVAKLHGPISPELMEMWEMRHHAHECQKDSQSAPLYEKLRQTLTSETLNFESDNDDNGHDTGNPDFDMPGNAYMDEDFPPWNKENALLASIAESEKQTEMAARVSTWKQRIEHHLEGQESHPPFDIRDYGERILDKLSVEESSNSVLPFSDLVSGQEKYDVARSFSSLLQLVNNGEVNLERNGVDGEPVCYTSVNPFQVKLLKHNKKQDDAQFRFSKKRAKSPTKKSAAKGDKIKGGREKSLNSSLPTGSPPSSCKFPVKLGKASTVRLSPETKRRRRSLRSAG* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1186 626 PANTHER CONDENSIN-2 COMPLEX SUBUNIT H2 8 621 IPR031739 GO:0030261
Lan16g1186 626 MobiDBLite consensus disorder prediction 611 626 - -
Lan16g1186 626 Gene3D Structural maintenance of chromosome 1. Chain E 467 529 IPR023093 -
Lan16g1186 626 MobiDBLite consensus disorder prediction 289 305 - -
Lan16g1186 626 MobiDBLite consensus disorder prediction 289 314 - -
Lan16g1186 626 Pfam Condensin II complex subunit CAP-H2 or CNDH2, N-terminal 16 130 IPR009378 -
Lan16g1186 626 Pfam Condensin II complex subunit CAP-H2 or CNDH2, mid domain 153 300 IPR031719 -
Lan16g1186 626 MobiDBLite consensus disorder prediction 231 251 - -
Lan16g1186 626 MobiDBLite consensus disorder prediction 567 581 - -
Lan16g1186 626 MobiDBLite consensus disorder prediction 550 626 - -
Lan16g1186 626 Pfam Condensin II complex subunit CAP-H2 or CNDH2, C-term 302 552 IPR031737 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1186 Lan-Chr16 19363429 19369615 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1186 K11490 - gmx:100786571 867.455