Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1184 ATGGGGTATTGGACAACTAAGGTTCTTCCCAAGATCAAGAAGGTTTTTGAGAAAGATGGTACCAAGAAAGCTGTTGCTGCTGCTGAAATCTCCAAGTCCTTTGATGATTCCAAGGAGGAGCACAACAAATCCTTTGAAGAAAAAAAGACTGAACTTCAATCAAAGGTTGTTGAAATATATGAAGCTTCATCAACTGAAATCAAGAGATTGGTGAAAGAACGTGATGAAGCAGGACTAAAGAAGCACTCCAAAGCAGTGAACAAGTTCCTACAGGAGCTAGTTAAAATTGATTTCCCTGGATCCAAGCCAGTATCTGAAGCATCTTCGAAGTTTGGACCAGTCTTAGTTTCAGGCCCAGTATACTTTGTTTTTGAGAAAGTATCTACTTTCATAGTCACAGAAGAGAAAGTTGATGTCCCTGCTGCTACAGAAACTAAAACAGAAGAAGAAACAAGTACTACCAAAGAGAGAGAGATTGTGATTGAAGAAGAGAAAAAGGAAGATGAGAAAGCAAAAGTATTAGTTGAAACAACTGAGAAAACAGAATCATCTGAGCCACCACAAGCTGAACCAGCTAAAGTTGAAGAAAAACCAGATGATGCTGCAAAAGTGGAAGAGAAACTTGCTGAAGTAGTAGCTTCAGTTGAAAAAGCATAA 657 0.3866 MGYWTTKVLPKIKKVFEKDGTKKAVAAAEISKSFDDSKEEHNKSFEEKKTELQSKVVEIYEASSTEIKRLVKERDEAGLKKHSKAVNKFLQELVKIDFPGSKPVSEASSKFGPVLVSGPVYFVFEKVSTFIVTEEKVDVPAATETKTEEETSTTKEREIVIEEEKKEDEKAKVLVETTEKTESSEPPQAEPAKVEEKPDDAAKVEEKLAEVVASVEKA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1184 218 PANTHER PLASMA MEMBRANE-ASSOCIATED CATION-BINDING PROTEIN 1 1 203 - -
Lan16g1184 218 PANTHER PLASMA MEMBRANE-ASSOCIATED CATION-BINDING PROTEIN 1 1 203 IPR008469 GO:0046658
Lan16g1184 218 Pfam DREPP plasma membrane polypeptide 1 198 IPR008469 GO:0046658
Lan16g1184 218 MobiDBLite consensus disorder prediction 139 179 - -
Lan16g1184 218 MobiDBLite consensus disorder prediction 189 203 - -
Lan16g1184 218 MobiDBLite consensus disorder prediction 139 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1184 Lan-Chr16 19312479 19314056 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1184 - - adu:107466049 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0087 4 1186289 1187789 Lan16g1184 16 19312479 19314056 LSH
Lan16g1184 16 19312479 19314056 Lan19g0552 19 9076812 9078270 LSH