Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan16g1162 | ATGGCAGAACTGAGTTTCTTTGTTGGGGTGATAGGTAACATCATCTCAATTCTCTTGTTTCTTTCACCTGTGCCTGCGTTTTTTAGGATAGTAAAGCATAGATCTACAGAAGAGTTCTCAAGCATCCCTTACATTTGCACATTGCTTAATTGCTCCTTGTGGACTTACTATGGACTCATAAAATCTGGTGAATACCTTGTGGCCACTGTTAATGGCTTTGGCATCATGGTGGAGACAATCTATGTTATTCTATTTCTTATATATGCACCAAAAACTATGAGGATGAAAACTGTAATTGTGGCTGGGTTTTTGGATGTGGTGATTATGGGAGCAGCAATAGGTTTTACTCAATTAGCAATGAAGGAAGAGGATCGTATTAATGCTGTGGGTATCATGGGTGCTGGCTTGAACATTGTTATGTATGGCTCACCTCTTGCTATAATGAAAACAGTGGTGATGACAAAGAGTGTGGAATATATGCCATTCTTCCTTTCATTTTTCAGCTTCCTAAATGGTGGCATTTGGATGTTGTATGCTGTTCTTGTTCGTGATATTATCCTTGGGGTACCAAACGGTACAGGATTTGTACTTGGAGCAATGCAGTTAGTATTGTATGGGATCTACAGAAATGGAAAATCATCAAAACACATTTCAACTGAATTTGAAAAGGGATTGCAGCATGAGCATCTTATCTCTTCCTCAACCTAG | 708 | 0.3898 | MAELSFFVGVIGNIISILLFLSPVPAFFRIVKHRSTEEFSSIPYICTLLNCSLWTYYGLIKSGEYLVATVNGFGIMVETIYVILFLIYAPKTMRMKTVIVAGFLDVVIMGAAIGFTQLAMKEEDRINAVGIMGAGLNIVMYGSPLAIMKTVVMTKSVEYMPFFLSFFSFLNGGIWMLYAVLVRDIILGVPNGTGFVLGAMQLVLYGIYRNGKSSKHISTEFEKGLQHEHLISSST* | 236 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan16g1162 | 235 | Gene3D | - | 123 | 221 | - | - | |
| Lan16g1162 | 235 | Gene3D | - | 6 | 92 | - | - | |
| Lan16g1162 | 235 | PANTHER | BIDIRECTIONAL SUGAR TRANSPORTER SWEET | 4 | 234 | - | - | |
| Lan16g1162 | 235 | Pfam | Sugar efflux transporter for intercellular exchange | 128 | 212 | IPR004316 | GO:0016021 | |
| Lan16g1162 | 235 | Pfam | Sugar efflux transporter for intercellular exchange | 7 | 92 | IPR004316 | GO:0016021 | |
| Lan16g1162 | 235 | PANTHER | RAG1-ACTIVATING PROTEIN 1 | 4 | 234 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan16g1162 | Lan-Chr16 | 18908067 | 18916051 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan16g1162 | 1 | 232 | Miscellaneous Gene Families | AT4G15920 | 59.751 | 5.33e-97 | 281 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan16g1162 | K15382 | - | gmx:100808537 | 344.739 |