Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1071 ATGCATTCGTTCCTTTACAGAGCGAACGCGTTGTTAACCTTCGCCATTACGATTCTTGGTGTTGTTTGCGCCATTGCTTCTTTCACTGATAACTTCCACAATCCTACTCCTCATGCTCAAGTCAAGGTTTTGAATATTAACTGGTTTCAAAAACAACCTAACGGCAATGATGAGGTCAGCTTGACACTGAATATATCAGCAGATTTACAGTCACTTTTCACATGGAACACAAAACAGGTCTTTGTCTTTTTAGCTGCTGAGTATGAAACTCCAAAGAATGCTGTGAATCAGATATCTCTGTGGGATGGTATCATTCCTTCTAAAGAGCATGCAAAGTTTTGGACTCATACTTCGAATAAATACCGCTTCATTGATCAGGGAAGCAATTTGCGTGGTAAAGAATTCAACTTGACTATGCACTGGCACATCATGCCCAAGACTGGGAAAATGATTGCTGACAAAATAGTCATACCAGGTTACAAATTGCCAGCAGAATATAGATGA 504 0.3988 MHSFLYRANALLTFAITILGVVCAIASFTDNFHNPTPHAQVKVLNINWFQKQPNGNDEVSLTLNISADLQSLFTWNTKQVFVFLAAEYETPKNAVNQISLWDGIIPSKEHAKFWTHTSNKYRFIDQGSNLRGKEFNLTMHWHIMPKTGKMIADKIVIPGYKLPAEYR* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1071 167 Pfam Signal peptidase subunit 1 164 IPR007653 GO:0005787|GO:0006465|GO:0016021
Lan16g1071 167 PANTHER SIGNAL PEPTIDASE COMPLEX SUBUNIT 3 1 167 - -
Lan16g1071 167 PIRSF SPC3 1 167 IPR007653 GO:0005787|GO:0006465|GO:0016021
Lan16g1071 167 PANTHER MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23 1 167 IPR007653 GO:0005787|GO:0006465|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1071 Lan-Chr16 17863681 17866224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1071 K12948 - gmx:100306631 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0865 4 10536599 10537714 Lan16g1071 16 17863681 17866224 LSH