Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1008 ATGACTAGTGGTGGTTATATTGGAATCTCTACCATGAAGCCTTGTTCTAGAATCCGAAGTAGCTATAAAAGTTCATTACTTTTTGGGTTTTCTCCAACTAAGTTTCATGGTTCATGTTCAGCAATAAAGGGGTTGTTGTTCAAATCACATAATCCAAAATCAAATCACAGCCATAGATACCATTGTTGTGATACTCAGATTGTAGGGTTTATACGTTTGATCAATCTGAATCGGAGAGATTTTAGTGTTTCCGATTCGAATTGGGCCTGTTCTAGGAATATTAACACTAGAATTTGTGCCAATTTAGGTAGTTTAAGGCCTAGGGTTGTTTTGTTGATACCGAATGTAGCTTCGGATATTAGGAGCCAATCTACATCGGTTGATTCTCATGTTAACGACACAAGCTTTGATAAGATATACACTCAAAGTGGCTTGAATGCAAAGCCCTTAGTGATTGAAAGAATTGAGACTGATCAAGGTAAATTTGAAGAAGTAGCTGAAGAAAGAAGCGACGGGTCAAATGTAAATATAGATAATTTGGAGGATCTGAATAAGAGTAAGGTTGAGAGTGAGTTATCTGATATTGAAAAGGAAGCTTGGAAGTTGCTTCGTGATTCTGTTGTCACTTACTGTGGGAATCCGGTTGGGACTGTTGCAGCGAACGATCCTGCTGACAAACAACCACTGAATTATGATCAAGTTTTTTTCCGTGATTTCATTCCATCAGCACTTGCCTTTCTGCTCAATGGTGAAGGGGAAATTGTCAAGAATTTTCTACTTCACACATTGCAATTGCAGAGTTGGGAGAAAACTGTTGACTGCTACAACCCAGGGCAAGGGTTGATGGCAGCAAGCTTCAAAGTTAGAAGTGTGCCTCTTGATGGAAGCAGTGAAGCATTTGAGGAAGTTTTAGATCCCGATTTTGGTGAATCGGCAATTGGCCGGGTTGCACCTGTTGATTCAGGATTGTGGTGGATTATATTGTTGAGAGCGTACGGGAAGCTAACGGGTGATTATGCATTGCAAGAAAGGGTGGATGTCCAGATGGGCATAAGACTTATTCTTAAGTCGTGTCTAACCGATGGGTTTGATATGTTTCCTTCTCTACTAGTCACTGATGGTTCCTGCATGATTGATAGAAGGATGGGCATTCATGGTCACCCTCTTGAGATCCAAGCCTTATTTTACTCAGCTTTACGCTGCTCTCATGAGATGCTGACAGTCAATGATGCAACTAAGAATCTGGTGGCCGCCGTTGGTAATCGCCTGAGTGCACTCTCGTTCCATATGAGAGAATATTATTGGGTTGATAAGAAGAAGCTTAACGAAATTTATCGCTATAAAACGGAAGAGTATTCTATGGACGCTGTGAACAAGTTTAACATCTATCCGGAGCAAATCCCTACATGGCTAGTGGACTGGATCCCCGAGGAAGGTGGATATTTCATGGGCAATTTGCAACCTGCTCATATGGACTTCAGGTTTTTTACACTTGGAAACCTTTGGGCCATTGTTTCTTCTTTAGGCACGACAAGACAGAACAGGGAAATTTTGAATTTAATTGAGACTAGATGGGATGATCTTGTTGCTCAAATGCCTCTGAAGATATGTTATCCAGCACTGGAGAGTGAGGAATGGCGTATAATCACTGGTTGTGACCCGAAGAACACTCCGTGGTCATATCACAATGGTGGATCTTGGCCAACACTTCTCTGGCAGTTCACCTTAGCCTGCATGAAGATGGGAAAGCCTGAATTGGCACAGAAGGCAGTTAATTTAACAGAGGAAAGACTTTCGATGGATAGATGGCCGGAGTATTACGATACACGAAACGGAAAGTTTATAGGGAAGCAATCTCGATTGATGCATACATGGACTATTGCTGGTTTCCTAACCTCAAAGATGCTTTTAAAGAATCCAAAGAAGGCATCGTTGTTGTTTTGGGAGGAGGATTTTGAAGTTCTACAGAACTGTGTCTGCATGCTAAACAAAACTGGTAGAAGGAAGTGTTCTCGTTTTGCTGCGAAAGCTCAGATTCTTGTTTAA 2046 0.414 MTSGGYIGISTMKPCSRIRSSYKSSLLFGFSPTKFHGSCSAIKGLLFKSHNPKSNHSHRYHCCDTQIVGFIRLINLNRRDFSVSDSNWACSRNINTRICANLGSLRPRVVLLIPNVASDIRSQSTSVDSHVNDTSFDKIYTQSGLNAKPLVIERIETDQGKFEEVAEERSDGSNVNIDNLEDLNKSKVESELSDIEKEAWKLLRDSVVTYCGNPVGTVAANDPADKQPLNYDQVFFRDFIPSALAFLLNGEGEIVKNFLLHTLQLQSWEKTVDCYNPGQGLMAASFKVRSVPLDGSSEAFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYALQERVDVQMGIRLILKSCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSHEMLTVNDATKNLVAAVGNRLSALSFHMREYYWVDKKKLNEIYRYKTEEYSMDAVNKFNIYPEQIPTWLVDWIPEEGGYFMGNLQPAHMDFRFFTLGNLWAIVSSLGTTRQNREILNLIETRWDDLVAQMPLKICYPALESEEWRIITGCDPKNTPWSYHNGGSWPTLLWQFTLACMKMGKPELAQKAVNLTEERLSMDRWPEYYDTRNGKFIGKQSRLMHTWTIAGFLTSKMLLKNPKKASLLFWEEDFEVLQNCVCMLNKTGRRKCSRFAAKAQILV* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1008 681 Gene3D - 227 628 IPR012341 GO:0005975
Lan16g1008 681 PANTHER - 5 680 IPR024746 GO:0033926
Lan16g1008 681 SUPERFAMILY Six-hairpin glycosidases 200 632 IPR008928 GO:0005975
Lan16g1008 681 Pfam Alkaline and neutral invertase 199 640 IPR024746 GO:0033926
Lan16g1008 681 PANTHER ALKALINE/NEUTRAL INVERTASE C, MITOCHONDRIAL 5 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1008 Lan-Chr16 17262080 17266875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1008 - - adu:107462633 1185.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g1008 16 17262080 17266875 Lan2g0260 2 2141447 2144994 LSH
Lan16g1008 16 17262080 17266875 Lan8g0358 8 5717106 5721935 PCT
Lan8g0358 8 5717106 5721935 Lan16g1008 16 17262080 17266875 PCT