Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0971 ATGGCTAGAAAAAAGATCAGAGAATTCCACTCTAAGAATCTCATCAAAGAACATCTCAAACGCATTGCTTCAATTCATCTTGATACCCTTTCAGCTCAGGTGACAGAATCAACTGATTTTGTTGAGTTGACAAATCAATATCCTTGGGTTTCTACGACCAAGTTGGTTGTGAAGCCTGATATGTTGTTTGGGAAACGTGGAAAGAGTGGTTTAGTTGCTCTTAATTTAGATATAGCCCAAGTGGCTCAGTTTGTTAAAACTCGCCTTGGTGTTCAGGTTGAGATAGGTGGTTGCAAGGCACCTATAACTACATTCATTGTTGAACCATTTGTGCCTCATGATGACGAGTATTACCTCTCTATTGTTTCCGAAAGGCTGGGGTGTACTATCAGCTTCTCAGAATGTGGAGGCATAGAAATTGAAGAGAACTGGGATAAGGTTAAAACTATATTCCTTCCGACCGAGAAAACTATGACTCTAGAAGCATGTGCACCATTGATTGCTACACTTCCTTTGGAGATTCGAGGAATAATTGGCGATTTCATAATGGGGGTGTTTGCTGTCTTTCAAGATCTCGACTTCAGCTTTCTCGAGATGAATCCGTTTACACTGGTCAACGAGAAGCCATATCCACTGGATATGAGAGGGGAACTAGATGACACTGCTGCATTCAAGAACTTCAACAAGTGGGGCAAGATCGAGTTTCCGTTGCCTTTTGGAAGAGTTCTGAGCCCTGCCGAAAGCTTCATTAATTCTTTCGATGAGAAGACAAGTGCATCCCTGAAATTTACCGTATTAAACCCAAAAGGACGCATCTGGACAATGGTAGCCGGAGGTGGTGCAAGTGTTATTTATGCTGATACTGTTGGAGATTTAGGCTATGCATCAGAGCTTGGAAACTATGCCGAGTACAGTGGAGCTCCAAATGAGGACGAGGTGTTGCAGTATGCAAGAGTCGTAATCGATTGTGCTACATCAGACCCCGATGGCCGTAAGAGAGCCCTTCTTATTGGAGGTGGCATTGCAAACTTCACCAACGTTGCTACCACATTCAGTGGTATTATTCGAGCGCTGAAAGAGAAGGAATCGAAGCTTAAAGCAGCGAGAATGAACATTTATGTTAGAAGAGGTGGTCCAAACTATCAGACCGGTTTGGCAAAAATGTCTGCATTGGGCGAAGAATTGGGACTACCAATTCAGGTTTATGGACCAGAAGCCACAATGACCAGTATATGCAAACAAGCTATTGATTGCATCATTTCTGAAGCATAA 1272 0.4285 MARKKIREFHSKNLIKEHLKRIASIHLDTLSAQVTESTDFVELTNQYPWVSTTKLVVKPDMLFGKRGKSGLVALNLDIAQVAQFVKTRLGVQVEIGGCKAPITTFIVEPFVPHDDEYYLSIVSERLGCTISFSECGGIEIEENWDKVKTIFLPTEKTMTLEACAPLIATLPLEIRGIIGDFIMGVFAVFQDLDFSFLEMNPFTLVNEKPYPLDMRGELDDTAAFKNFNKWGKIEFPLPFGRVLSPAESFINSFDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEDEVLQYARVVIDCATSDPDGRKRALLIGGGIANFTNVATTFSGIIRALKEKESKLKAARMNIYVRRGGPNYQTGLAKMSALGEELGLPIQVYGPEATMTSICKQAIDCIISEA* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0971 423 Pfam ATP-grasp domain 6 203 IPR013650 -
Lan16g0971 423 Gene3D - 1 233 - -
Lan16g0971 423 Pfam ATP citrate lyase citrate-binding 241 417 IPR032263 -
Lan16g0971 423 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 6 236 - -
Lan16g0971 423 SUPERFAMILY Succinyl-CoA synthetase domains 257 404 IPR016102 -
Lan16g0971 423 PANTHER ATP-CITRATE SYNTHASE 1 423 - -
Lan16g0971 423 Gene3D - 240 422 IPR016102 -
Lan16g0971 423 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 3 1 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0971 Lan-Chr16 16779761 16784881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0971 1 420 Acyl Lipid Metabolism Gene Families AT1G09430 84.762 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0971 K01648 - gmx:100787551 763.837