Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0961 ATGCTACGTTTGAAATCGTTTCGACCTACGAGTGATAAAATCGTGAAGCTCCAATTGCATCCAACGCATCCATGGATGGTAACTGCTGATGATTCCGATCGTGTTTCCGTTTGGAATTGGGAACATCGTCAGGTCATATATGAGTTGAAAGCTGGTGGAGTTGATCAGCGACGTTTGGTTGGTGTTAAATTGGAGAAGCTAGCAGAGGGAGAAACAGAGTCCAAAGGGAAACTCACAGAATCCATTCGTGGAGGAAGTGTTAAGCAGGTGGCTTTTTATGATGATGATGTACACTTTTGGCAACATTGGCATAATCGTTCTTCAGCTGCAGAGGCTCCAACAGGTGTCCATACATCATCTTTTAGTTCTCCTGCCCCATCGACAAAAGGGAGGCATTTTCTTGTTATATGTTGTTTAAACAAAGCTATATTTTTGGATTTGGTGACGATGCGTGGCCGTGACGTACCAAAGCAAGAGCTTGATAACAAGTCCCTTCTGTGCATGGAGTTCCTTTATAGATCTGGCGTTGGTGATGGTCCTCTTGTTGCTTTTGGTGCATCTGATGGTGCCATTAGAGTTATCTCAATGATCACATGGAAGCTTGTGCGAAGGTACACTGGAGGTCATAAAGGATCAGTCTCTTGCTTGATGTCCTTCATGGCTTCTTCTGGTGAGTCTCTCCTGGTTTCTGGTGCTAGTGATGGATTGCTCATAGTCTGGAGTGCTGATCATGGACCAAGTTCACGTGAACTTGTACCCAAGCTGAGTTTAAAAGCACATGATGGCGGAGTTGTGGCGGTTGAGCTATCTAGGGTGATAGAAGGTGCTCCTCAGCTAATTACAATTGGTGCAGATAAAACATTAGCTATATGGGACACAGTCTCCTTTAAGGAGCTACGGCGTCTAAAGCCAGTTCCAAAATTGGCTTGCCACAGTGTGGCTTCTTGGTGCCACCCTCGAGCTCCAAACCTTGATATTCTAACTTGCGTCAAAGATTCTCACATATGGGCAATTGAGCATCCCACTTATTCTGCTCTCACAAGGCCATTGTGCGAATTGACCACAGTTATTCCTCCACAAGCTCTTGCTCCTAATAAGAAACTGAGGGTGTATTGCATGGTTGCACATGCTTTACAGCCACATCTTGTTGCTACTGGAACCAATATTGGTGTTATTATCTGCGAGTTTGATCCTAGATCTCTTCCTCCTGTAGCTCCGCTACCAACCCCGTCAGACAGCAGAGAGCATTCTGCGGTATTTGTAATTGAAAGAGAACTAAAGCAATTAAATTTTCAGTTAAACAACTCAGCAAATCCATCCCTTGGAAACAGTAGTTCCTTTTCAGAAACAGGAAAATCCAAGGGAGATTCTTTTGAACCATTACCTGTCAAGCAGGGGAAGAAGCGCATTAGTACACTTGTTCCTCATGATTCATACTCAGTTCTTTCTGTCAGCAGTTCAGGAAAGTACCTTGCAATAGTTTGGCCAGATATTCCATATTTCTCGGTCTACAAGGTTAGTGATTGGTCAGTTGTTGACTCTGGCAGTGCAAGGCTTCTTGCTTGGGATACATGTCGTGACAGATTTGCTATATTGGAATCATCAGTACCTCCTAGAATTCCTGTAGTTCCCAAGGGTAGTTCATCAAAAAGAGCGAAAGAAGCTGCTGCAGCACAAGCAGCAGCAGCAGCTTTTGTTGCTGCTGCCTCTTCCTCTGCTTCTGTTCAAGCCCGCATCTTGTTAGATGATGGAACATCAAATATACTAATGAAGCCTGTTGGTGCACGCAGTGAACCAGTCATTGGTTTGCATGGAGGGGCACTGCTTGGTGTTGCCTATCGAACATCTAAGAGAGTCAGTCCTATTGCTGCTACAGCTATTTCAACAGTCCAGTCTATGCCCTTATCAGGCTATGGGGGCAGTGGTCTTTCTTCCTTTACTACTTACGATGATGGATTTTCTTCTCATAGACCAGCTGAGGCGGCACCACAAAACTTCCAGCTTTACAGTTGGGAGACATTCCAGCCTGTCGGTGGCCTACTTCCTCAGCCAGAATGGACTGCTTGGGACCAAACTGTCGATTACTGTGCATTTGCATACCAGCAATACATAGTCATATCTTGTTTGCGCCCACAATATAGATACCTGGGGGACGTTGCGATCCCCTATGCTACTAGTGCTGTTTGGCACCGGAGGCAACTGTTTGTTGTTACACCAACTACTGTAGAAATTGTGTTTGTGGACGCTGGGGTTTCACAAATTGACATTGAAAGTAAAAAGATGAAAGAAGAGCAGAGAATGAAAGAAGCACAGGCAAGAGCAGTTGCCGAGCATGGAGAGTTAGCACTGATTGCAGTAGATGGTCCCCAAGCTACTACTACAGAAGAGAGAATCTCATTGAGGCCACCAATGCTGCAGGTGGTTCGGTTGGCATCCTTTCAGCATTCTCCTTCAGTGCCACCTTTCTTAACATTGTTAAAACAATCTAGAGTTGATGGTGATGACTCTTGGATGGCAAGAGAAGCTGAAGAGAGTAAGGCCAGTGAGGTTGCTGTTGGTGGTGGGGGTGTGTCTGTGGCAATTACTCGTTTTCCAACGGAGCAGAAACGTCCAGATGGGCCTCTTGTTGTGGTAGGTGTCAGAGATGGAGTTCTCTGGCTAATTGACAGGTACATGTGTGCTCATGCCTTGTCCTTGAGTCATCCTGCTATTCGTTGTCGATGTCTTGCTGCTTATGGTGATGCTGTTAGTGCAGTAAAATGGGCAAGCAGGCTTGGAAGAGAACACCATGATGACATAGCACAGTTTATGCTTGGAATGGGCTATGCTAATGAAGCACTTCACTTGCCTGGAATATCTAAGCGGCTGGAGTTTGATTTGGCAATGAAGAGCACTGATTTGAAGAGAGCTCTTCAGTGTCTTCTTACCATTAGTAACAGCAGGGATATAGGACATGATAATACTCCTGGGCTTGGTTTGAATGACATTCTTAATTTACAACAACATCAAGAGAAAAAACCAGATTTAGTTGATGGCGTTGAGGGTATAGTGAAATTCACGAAAGAGTTTTTGGATCTTATTGATGCTGCAGATGCTACTGCACAGGGTGAAGTTGCTCGTGAAGCTCTCAAAAGGTTTGCTGCAGCTGGTGCAGTGAAAGGGGCTTTGCAAGGTCATGAGTTGAGAGGATTAGCATTACGCCTTGCAAATCATGGGGAGCTGACTCGGCTAAATGGTTTGGTAAACAACTTAGTCACACTTGGCTTGGGACGGGAAGCTGCATTTGCTGCTGCTGTCTTGGGAGACAATGTTCTTATGGAGAAAGTTTGGCAGGATAATGGAATGCTGGCAGAGGCTGTGCTTCATGCTCATGCACACGGTCGTCCAAGTTTGAGGAACTTGGTTCAGGCCTGGAACCAAATGTTACAGAGAGCGATTGAGCCGAATTCGTCACAGAAGACAGATGCTACATCTGCATTTCTTGATTCTCTTGAGGAGCCTAATCTTACAAGTTTGGCAGAAGCAGGGAAGAAACCTCCTATTGAAATCTTACCTCCTGGGATGGCGTCTCTTAATGCTCCTCCTATTTCCATCCAGAAAAAACCAGCTTCTGCTGCTCAGAATTCACAACAGGAACCAGGCGTTCAATTGGCAATTGAAGCACCTCCTACAACCACAGCAGCGCCAGAGAGTGCTACACAGATACAACAGCCTGAAGCCACTGATGCACCAGTGACTGATCCACCTCAGCCCAAGGGTACCTCAGAGTCCATGCCGGTTCCAGAGTCTGCTCCACCTAAACCAGAGTCAGGTGAAACCGTTGTTGATAATGAACATCCTACCCTTGCATCAGCAAGTGATACAACTCCAACAGTTAATTGGGAAACCATTCAGGCTGAGTCTACGAGCATTCCACCACCACCAGAGGTCCCATCACCAGTAGCAGTGGCTCGAGCGACTAATGCCCCGACTCCAACTACAGTACCTGCGACTAATGCCCCAACTCCAACTACAGTACCAGCTACTCATGCCCCAAGTCCAACTACAGTACCTCCTACTGACCCTTTTTTCCTATGA 4077 0.4592 MLRLKSFRPTSDKIVKLQLHPTHPWMVTADDSDRVSVWNWEHRQVIYELKAGGVDQRRLVGVKLEKLAEGETESKGKLTESIRGGSVKQVAFYDDDVHFWQHWHNRSSAAEAPTGVHTSSFSSPAPSTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLYRSGVGDGPLVAFGASDGAIRVISMITWKLVRRYTGGHKGSVSCLMSFMASSGESLLVSGASDGLLIVWSADHGPSSRELVPKLSLKAHDGGVVAVELSRVIEGAPQLITIGADKTLAIWDTVSFKELRRLKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTTVIPPQALAPNKKLRVYCMVAHALQPHLVATGTNIGVIICEFDPRSLPPVAPLPTPSDSREHSAVFVIERELKQLNFQLNNSANPSLGNSSSFSETGKSKGDSFEPLPVKQGKKRISTLVPHDSYSVLSVSSSGKYLAIVWPDIPYFSVYKVSDWSVVDSGSARLLAWDTCRDRFAILESSVPPRIPVVPKGSSSKRAKEAAAAQAAAAAFVAAASSSASVQARILLDDGTSNILMKPVGARSEPVIGLHGGALLGVAYRTSKRVSPIAATAISTVQSMPLSGYGGSGLSSFTTYDDGFSSHRPAEAAPQNFQLYSWETFQPVGGLLPQPEWTAWDQTVDYCAFAYQQYIVISCLRPQYRYLGDVAIPYATSAVWHRRQLFVVTPTTVEIVFVDAGVSQIDIESKKMKEEQRMKEAQARAVAEHGELALIAVDGPQATTTEERISLRPPMLQVVRLASFQHSPSVPPFLTLLKQSRVDGDDSWMAREAEESKASEVAVGGGGVSVAITRFPTEQKRPDGPLVVVGVRDGVLWLIDRYMCAHALSLSHPAIRCRCLAAYGDAVSAVKWASRLGREHHDDIAQFMLGMGYANEALHLPGISKRLEFDLAMKSTDLKRALQCLLTISNSRDIGHDNTPGLGLNDILNLQQHQEKKPDLVDGVEGIVKFTKEFLDLIDAADATAQGEVAREALKRFAAAGAVKGALQGHELRGLALRLANHGELTRLNGLVNNLVTLGLGREAAFAAAVLGDNVLMEKVWQDNGMLAEAVLHAHAHGRPSLRNLVQAWNQMLQRAIEPNSSQKTDATSAFLDSLEEPNLTSLAEAGKKPPIEILPPGMASLNAPPISIQKKPASAAQNSQQEPGVQLAIEAPPTTTAAPESATQIQQPEATDAPVTDPPQPKGTSESMPVPESAPPKPESGETVVDNEHPTLASASDTTPTVNWETIQAESTSIPPPPEVPSPVAVARATNAPTPTTVPATNAPTPTTVPATHAPSPTTVPPTDPFFL* 1359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0961 1358 Coils Coil 753 773 - -
Lan16g0961 1358 SUPERFAMILY WD40 repeat-like 6 506 IPR036322 GO:0005515
Lan16g0961 1358 MobiDBLite consensus disorder prediction 1226 1257 - -
Lan16g0961 1358 Gene3D - 907 1160 - -
Lan16g0961 1358 PANTHER TSET COMPLEX MEMBER TSTF 1 1187 - -
Lan16g0961 1358 PANTHER TSET COMPLEX MEMBER TSTF 1 1187 - -
Lan16g0961 1358 Gene3D - 3 438 IPR015943 GO:0005515
Lan16g0961 1358 MobiDBLite consensus disorder prediction 1277 1303 - -
Lan16g0961 1358 MobiDBLite consensus disorder prediction 434 453 - -
Lan16g0961 1358 MobiDBLite consensus disorder prediction 1319 1344 - -
Lan16g0961 1358 MobiDBLite consensus disorder prediction 1201 1215 - -
Lan16g0961 1358 MobiDBLite consensus disorder prediction 1175 1358 - -
Lan16g0961 1358 ProSiteProfiles Trp-Asp (WD) repeats profile. 257 301 IPR001680 GO:0005515
Lan16g0961 1358 MobiDBLite consensus disorder prediction 434 461 - -
Lan16g0961 1358 SMART WD40_4 1 39 IPR001680 GO:0005515
Lan16g0961 1358 SMART WD40_4 250 292 IPR001680 GO:0005515
Lan16g0961 1358 SMART WD40_4 198 241 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0961 Lan-Chr16 16678952 16694598 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0961 - - lang:109330065 2539.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0932 4 11710479 11711578 Lan16g0961 16 16678952 16694598 LSH