Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0959 ATGGCGAAGGAACCAGAACAAGTTATGAAGATGAGAAAAGGTTCAGTTCTTGGCAAAAAAACTATTCTCAAAACCGATCATTTCCCTGGTTGTCAGAACAAACGTCTTTTTCCTCAAATTGATGGTGCTCCTAATTATCGTCAGGCTGAGTCATTGCATGTTCATGGTGTTGCAATTCCTACAATTGATGGAATCAGAAATGTTCTTAAGCATATTGGTGCTCAATTCCAAGCTAAAGTTCTTTGGATTAGTCTTCGTGAAGAACCTCTTGTGTATGTTAATGGTCGTCCGTTTGTTTTGCGTGATGTGGAGAGACCATTCTCCAACCTCGAGTATACGGGAATTAATAGAGAAAGAGTTGAGCAGATGGAAGATCGTTTGAAAGAAGACATCCTCATGGAAGCTGAAAGATATGAAAATAAAATCCTTGTCACTGATGAGCTCCCAGATGGTCAGATGGTGGACCTATGGGAACCAGTGTCGTCTAATTCTGTTAAGACGCCACTCGAGGTGTATGAGGAATTGCAAGTGGAGGGATACCTTGTCGATTACGAGCGTGTTCCTGTAACTGATGAAAAATCACCAAAGGAACGGGATTTTGATATTTTGGTCCAAAAAATTTCTCAAGCTGATGTAAATACAGAGATAGTTTTTAACTGTCAAATGGGGCGTGGACGAACGACAACTGGAATGGTCGTTGCAACTTTGGTTTACTTCAACAGAATTGGAGCCTCTGGGATTCCAAGAAGCAATTCAATTGGTAGAATTTCTCAATTTATGACCAACGTAGCTGATCGTTTGCCTAACTCAGAGGAGGCAATTCGCAGGGGAGAATATGTAGTCATAAGAAGCTTGATTCGGGTGTTAGAGGGTGGCGTTGAGGGAAAAAGACAAGTGGACAAAGTCATTGACATGTGTGCTTCAATGCAGAACTTGCGGGAAGCAATTGCCACCTACCGCAGTAGTATTCTGCGGCAACCAGATGAGATGAAAAGGGAGGCATCACTTTTCTTTTTTGTGGAATACTTAGAGAGATACTACATTTTAATATGTTTTGCTGTGTACTTGCATTCGGAAAGGGCTGTACTCCTTTCTAGTACTGCTACTCAGAGTAGTTTTGCTGACTGGATGAGAGCGAGGCCTGAACTCTACAGTATCCTTCGCAGGTTACTCAGGAGAGATCCAATGGGTGCACTTGGATATTCAAGTTCAAAACCATCTCTGAAGAAGATATCTGAGTCTCCTGATGGCCGTCCTTCTGAGATGGGTGTGGTTGCTGCCTTGAGAAACGGTGAGGTTCTTGGTAGTCAAACGGTGCTAAAAAGTGATCACTGTCCTGGGTGTCATAGCCAAAGTTTACCTGAGAGAGTGGATGGGGCTCCTAATTTCCGTGAAGTTCCTGGTTTTCCAGTTTATGGGGTTGCGAATCCAACTATCGATGGTATTCGATCTGTCCTTCATAGGATAGGTACCTCTAAAGGTGGACGCCCAGTACTTTGGCATAATATGAGGGAAGAACCTGTTATTTACATTAATGGGAAGCCATTTGTCCTTCGCGAAGTTGAAAGACCATATAAAAACATGCTGGAGTACACGGGTATTGACTGTGAAAGAGTGGAGAAAATGGAAGCTCGGTTAAAAGAAGATATCCTACGGGAAGCTAAACAATATGACAGTGCCATTATGGTTATTCATGAAACAGATGATGGGCATATCTTTGATACCTGGGAGCATGTTACCCCAGATGTGATTCAAACCCCAGTTGAAGTTTTTAAAAGCCTGGAGACTGATGGGTTTCCCATTAAGTATGCACGTGTCCCCATCACTGATGGAAAAGCTCCTAGAAGTTCTGACATTGACACTTTGACAACTAATATTGCTTCTGCTGTTAAGGACACTGCTTTTGTTTTCAATTGTCAGATGGGCAGGGGCAGGACAACCACTGGTACTGTCATAGCTTGCCTTGTGAAACTTCGAATTGATAATGGTAGGCCCATTAAAATACTAAGTGATGATGTGAACCATGAAGCATCAGATGGTGGTTTCTCAAGTGGAGATGAAGCTGGAGGGTATGTCACTGCAACTGCATTGACCTCCGATACTTCACAAATAAAGACAGATGAGAAACAGAATCATGTTTTTGGGATAAATGACATCCTCTTATTGTGGAAGATAACAACATTATTTGATAACGGTGTTGAATGCCGAGAGGCCTTAGATGCTATTATTGATAGATGTTCTGCACTTCAAAACATTCGGCAAGCTGTTCTTCAATATCGAAAAGTATTCAATCAACAGCATGTCGAGCCTAGAGTGAGGAGGGTGGCATTAAGTCGTGGTGGTGAGTACTTAGAGCGCTACTTCCGTCTAATTGCTTTTGCAGCATATCTTGGGAGTGAAGCCTTTGATGGCTTTTGTGGACAAGGAGAATCCAAAATGACATTTAGGAATTGGTTGCATCAGAGGCCAGAGGTGGAGGCTATGAAATGGAGCATCAGATTAAGACCAGGGAGATATTTCACTATCCCGGAGGAGTTGAGAAAACCACAAGAGTGTCAACATGGAGATGCTGTGATGGAGGCCATTGTCAAGGCCCGTAATGGATCTGTTCTAGGGAAAGGCTCCATACTGAAAATGTATTTCTTTCCTGGTCAGACAACTTCCAGTCACATACAAATACATGGTGCACCACATGTTTTCAAGGTTAATGAATACCCTGTGTATAGCATGGCAACTCCAACCATCTCTGGTGCCAAGGAGATGCTAGCTTATTTGGATGCTAAGCCTAATGCCTCCTTGACTACTCGAAAAGTTATATTGACGGATCTGAGAGAAGAAGCAGTTGTTTATATCAATGGTACTCCTTTTGTCCTGAGGGAGTTAAACAAACCTGCTGATACACTCAAGCATGTGGGAATCACTGGTCCTTTGGTGGAACACATGGAAGCGCGGCTGAAAGCAGATATACTAGCAGAGATTAGACAGTCTGGTGGGCGAATGTTATTGCATCGTGAAGAATATAACCCTTCAACGAATGAGTCTGCTGTGGTTGGATACTGGGAAAACATTGTAGCAGATGACGTGAAGACACCTGTGGAAGTTTATTCTGTTCTGAAAGATGATGGATATGATATAATCTACCGGAGGATACCCTTAACAAGGGAGAGAGATGCTTTAGCCTCTGACGTTGATGCAATACAATACTGTAAAGATGACTCTGCGGGGAGTTACCTTTTCGTATCACACACAGGTTTTGGCGGAGTCGCATATGCAATGGCCATGATCTGTATCAGACTTGCAGCAGAGGCCAATTTTCCATCTAAAGTCACACAGCCATTGTTTGGTCCCGACATATCTGCTGTGACCGAAAAGAACTTGCCATCTCGAGCTTCAAATGAAACAGCGCTCAAGATGGGTGACTATCGTGACATTTTAAGCCTTACAAGAGTCCTCATACATGGTCCCCAAAGCAAAGCAGATGCTGACATTGCTATTGAAAGATGCGCAGGCGCGGGGCTCATTCGAGATGATATTCTTTATTACAGAAAAGAATTGGAGAAGTTTACTGACGATGATGATGAGGAACGTGCATATTTTATGGACATGGGTATTAAGGCTCTGAGGCGGTATTTTTTCCTGATCACATTCAGATCTTACCTATACAGCACCTCTCCTGCAAATATGAAATTTAGTGCATGGATGAATGCAAGACCAGAGCTTGGTCATCTATGTAACAATCTAAGAATTGATAAATAA 3756 0.4271 MAKEPEQVMKMRKGSVLGKKTILKTDHFPGCQNKRLFPQIDGAPNYRQAESLHVHGVAIPTIDGIRNVLKHIGAQFQAKVLWISLREEPLVYVNGRPFVLRDVERPFSNLEYTGINRERVEQMEDRLKEDILMEAERYENKILVTDELPDGQMVDLWEPVSSNSVKTPLEVYEELQVEGYLVDYERVPVTDEKSPKERDFDILVQKISQADVNTEIVFNCQMGRGRTTTGMVVATLVYFNRIGASGIPRSNSIGRISQFMTNVADRLPNSEEAIRRGEYVVIRSLIRVLEGGVEGKRQVDKVIDMCASMQNLREAIATYRSSILRQPDEMKREASLFFFVEYLERYYILICFAVYLHSERAVLLSSTATQSSFADWMRARPELYSILRRLLRRDPMGALGYSSSKPSLKKISESPDGRPSEMGVVAALRNGEVLGSQTVLKSDHCPGCHSQSLPERVDGAPNFREVPGFPVYGVANPTIDGIRSVLHRIGTSKGGRPVLWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDCERVEKMEARLKEDILREAKQYDSAIMVIHETDDGHIFDTWEHVTPDVIQTPVEVFKSLETDGFPIKYARVPITDGKAPRSSDIDTLTTNIASAVKDTAFVFNCQMGRGRTTTGTVIACLVKLRIDNGRPIKILSDDVNHEASDGGFSSGDEAGGYVTATALTSDTSQIKTDEKQNHVFGINDILLLWKITTLFDNGVECREALDAIIDRCSALQNIRQAVLQYRKVFNQQHVEPRVRRVALSRGGEYLERYFRLIAFAAYLGSEAFDGFCGQGESKMTFRNWLHQRPEVEAMKWSIRLRPGRYFTIPEELRKPQECQHGDAVMEAIVKARNGSVLGKGSILKMYFFPGQTTSSHIQIHGAPHVFKVNEYPVYSMATPTISGAKEMLAYLDAKPNASLTTRKVILTDLREEAVVYINGTPFVLRELNKPADTLKHVGITGPLVEHMEARLKADILAEIRQSGGRMLLHREEYNPSTNESAVVGYWENIVADDVKTPVEVYSVLKDDGYDIIYRRIPLTRERDALASDVDAIQYCKDDSAGSYLFVSHTGFGGVAYAMAMICIRLAAEANFPSKVTQPLFGPDISAVTEKNLPSRASNETALKMGDYRDILSLTRVLIHGPQSKADADIAIERCAGAGLIRDDILYYRKELEKFTDDDDEERAYFMDMGIKALRRYFFLITFRSYLYSTSPANMKFSAWMNARPELGHLCNNLRIDK* 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0959 1251 CDD PTP_paladin 12 306 - -
Lan16g0959 1251 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 860 1063 IPR029021 -
Lan16g0959 1251 MobiDBLite consensus disorder prediction 401 420 - -
Lan16g0959 1251 Gene3D Protein tyrosine phosphatase superfamily 880 1109 IPR029021 -
Lan16g0959 1251 Gene3D Protein tyrosine phosphatase superfamily 21 283 IPR029021 -
Lan16g0959 1251 Gene3D Protein tyrosine phosphatase superfamily 438 676 IPR029021 -
Lan16g0959 1251 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 7 242 IPR029021 -
Lan16g0959 1251 Pfam Inositol hexakisphosphate 83 237 - -
Lan16g0959 1251 Pfam Inositol hexakisphosphate 942 1097 - -
Lan16g0959 1251 Pfam Inositol hexakisphosphate 501 657 - -
Lan16g0959 1251 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 425 658 IPR029021 -
Lan16g0959 1251 SMART PTPlike_phytase_2 501 657 - -
Lan16g0959 1251 SMART PTPlike_phytase_2 941 1099 - -
Lan16g0959 1251 SMART PTPlike_phytase_2 83 238 - -
Lan16g0959 1251 PANTHER METAL ION-BINDING PROTEIN 334 479 - -
Lan16g0959 1251 PANTHER METAL ION-BINDING PROTEIN 2 334 - -
Lan16g0959 1251 PANTHER METAL ION-BINDING PROTEIN 420 599 - -
Lan16g0959 1251 PANTHER METAL ION-BINDING PROTEIN 599 1251 - -
Lan16g0959 1251 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 334 479 - -
Lan16g0959 1251 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 2 334 - -
Lan16g0959 1251 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 420 599 - -
Lan16g0959 1251 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 599 1251 - -
Lan16g0959 1251 CDD PTP_paladin 429 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0959 Lan-Chr16 16658567 16667942 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0959 - - gmx:100788460 2175.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0959 16 16658567 16667942 Lan2g0248 2 2028665 2039958 LSH