Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0948 ATGAGAATTCATGGAAGATTTTTTTGGCGTTACATTTCTGAGTCACGAAAGGTTTTCGAATCAACCACCAATTTCTCATTCCGTCATCAAATTCCGTTTTCCCTCCGTTCTTATTCTTCCGCTGGAGAAGTTCAACCTCAAATGTCTACGGATCTGTTAAACATAATGGAACAGAGACTTCGCGTTATTGAACACACTACTACTTCGCTTAACCGTATTCTAAATCATCCAGAAGTATCACCGTCAGAGTATGCAAAAGCTAATAAGGAGCTCCGGAAGCTCAGTGGTTCTCTAGACCTTATTAGTGAGTTGAGGGCCAAACAGAAGGAAATTAATGGTTTGAAGTCGCTGATGGCTGAATGTTCTGAAGATAAAGACATGCTTAATATGGCAACAGAGGAAATTGGCCAGGTCGTAGAGGAAGAAAGAAGACTGCAAAATTTGCTATTGAAGTCATTACTTCCTAAGGATGATGCTGATGAAAGAGATTCTATTTTGGAGGTGAGAGCAGGCACTGGTGGGGAGGAGGCTTCCTTGTTTGCAATGGACATATTTAAAATGTATGAGAAGTATGCTCACCAGAAAGGCTGGAAGTTTGAAGTAGTAGATATTGCTCAATCTGATCATAAAGGATACAAGGAGGCTAGTGCAACCATTGCAGGATCTGGTGTTTTTGGGAAACTTAAATTTGAGAGTGGAATTCATAGAGTACAGCGAGTTCCTGCAACAGAAAAGTTGGGACGCATTCATACCAGTGCTGTTTCTGTTGCAATCCTCCCTCAGGCTGATGTGGTTGATGTTCAATTAAAGAATGACGACTTGAAAATCGATACCTATAGATCTGGTGGTTCAGGTGGCCAGCATGCAAATACAACCAACAGTGCTGTTAGAGTAACTCACATTCCAACTGGAATTGTGGTTGCTATACAAGACGAACGTTCTCAACATTCGAACAAGGCCAAAGCACTAAAGTTGCTGTGTGCAAAACTATATGAGATGGAAAGGTCCAGACTTCATAGTAATCGATCAAAGCTTCGATCAGAGCAGATTGGTAGTGGAGATAGATCGGAACGCATCCGAACATACAATTTTCCACAAGGCCGTGTAACTGATCACAGAGTTGGCATCACTTATCACTCAATAGATGATGTGATGCAAGGAGAGAGTCTTGATGTCTTCATTGAAGCTCTTCTATTGCAAGAAGAAATTGATGCAATTGCAACTTTTAGTGCTTCTCAGTAG 1242 0.4122 MRIHGRFFWRYISESRKVFESTTNFSFRHQIPFSLRSYSSAGEVQPQMSTDLLNIMEQRLRVIEHTTTSLNRILNHPEVSPSEYAKANKELRKLSGSLDLISELRAKQKEINGLKSLMAECSEDKDMLNMATEEIGQVVEEERRLQNLLLKSLLPKDDADERDSILEVRAGTGGEEASLFAMDIFKMYEKYAHQKGWKFEVVDIAQSDHKGYKEASATIAGSGVFGKLKFESGIHRVQRVPATEKLGRIHTSAVSVAILPQADVVDVQLKNDDLKIDTYRSGGSGGQHANTTNSAVRVTHIPTGIVVAIQDERSQHSNKAKALKLLCAKLYEMERSRLHSNRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSIDDVMQGESLDVFIEALLLQEEIDAIATFSASQ* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0948 413 Hamap Peptide chain release factor 1 [prfA]. 56 410 IPR004373 GO:0006415|GO:0016149
Lan16g0948 413 TIGRFAM prfA: peptide chain release factor 1 57 409 IPR004373 GO:0006415|GO:0016149
Lan16g0948 413 Coils Coil 104 124 - -
Lan16g0948 413 Pfam PCRF domain 65 256 IPR005139 GO:0006415
Lan16g0948 413 PANTHER LD18447P 37 409 - -
Lan16g0948 413 Gene3D - 165 390 - -
Lan16g0948 413 PANTHER LD18447P 37 409 - -
Lan16g0948 413 Gene3D - 49 158 - -
Lan16g0948 413 Gene3D - 270 358 - -
Lan16g0948 413 SMART PCRF_a_2 116 231 IPR005139 GO:0006415
Lan16g0948 413 Pfam RF-1 domain 265 373 IPR000352 GO:0003747|GO:0006415
Lan16g0948 413 SUPERFAMILY Release factor 70 401 IPR045853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0948 Lan-Chr16 16553221 16558587 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0948 K02835 - gmx:100800412 644.425