Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0943 ATGGAGAGGCAAAGGTTGGAGGGTAAGGTGGCTCTAATCACAGGGGCAGCTAGTGGAATTGGAGAAGAAACAGTGAGACTATTTGCTGAAAATGGTGCACTTATTGTTGCAGCAGATGTTCAAGATGAACTTGGTGAACAAGTTGCAGCATCAATAGGCTCAGAAAAAGTGACTTACCACCATTGTGATGTAAGAGATGAAAAACAAGTTGAGGAAACAATCAAATTCACTTTAGAAAAATATGGTCACATAGATATCCTATTTAGTAATGCTGGAATAGTAGGCTCCTTCTCAAGCATCCTCCAATTCGATTTCGATGAATTCGACAACATTATGGCCACAAATGTTCGTGGCACGGCCGCAACAATTAAGTATGCGGCTCGCGCCATGGTTGCGAAAAAAATCAATGGATCTATTATATGCACAACTAGTGTTGCAGCCTCTATTGGTGGAAGTGATCTTCATGCTTACACAACATCAAAACATGCTCTTGTTGGGTTAGTAAGATCAACATGTAGTGAACTTGGTGCTTATGGGATTAGGGTTAATAGTATTTCACCTTATGCAGTTGCTACTCCTCTTACATGCAAAGTTTTAAATGTTGAACCTCATGAAGTTGAAGCTCATAGTAGCTATGAGGCAAATCTGAAAGGTGTTGTGTTGAAGGCTAAACATATTGCAGAAGCAGCTTTGTATCTTGCTTCTGATGAAGCTGCTTATATTAGTGGTCACATCTTGGTGGTTGATGGTGGATTCTCTGTTGTAAAAAGGAGTACTACTTCTTTTGCACCAGTTTACACATAA 804 0.3993 MERQRLEGKVALITGAASGIGEETVRLFAENGALIVAADVQDELGEQVAASIGSEKVTYHHCDVRDEKQVEETIKFTLEKYGHIDILFSNAGIVGSFSSILQFDFDEFDNIMATNVRGTAATIKYAARAMVAKKINGSIICTTSVAASIGGSDLHAYTTSKHALVGLVRSTCSELGAYGIRVNSISPYAVATPLTCKVLNVEPHEVEAHSSYEANLKGVVLKAKHIAEAALYLASDEAAYISGHILVVDGGFSVVKRSTTSFAPVYT* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0943 267 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 254 IPR036291 -
Lan16g0943 267 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 144 172 IPR020904 GO:0016491
Lan16g0943 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Lan16g0943 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 IPR002347 -
Lan16g0943 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 IPR002347 -
Lan16g0943 267 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Lan16g0943 267 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Lan16g0943 267 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Lan16g0943 267 PRINTS Glucose/ribitol dehydrogenase family signature 157 176 IPR002347 -
Lan16g0943 267 PRINTS Glucose/ribitol dehydrogenase family signature 178 195 IPR002347 -
Lan16g0943 267 PRINTS Glucose/ribitol dehydrogenase family signature 216 236 IPR002347 -
Lan16g0943 267 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 261 - -
Lan16g0943 267 PANTHER OXIDOREDUCTASE-RELATED 1 261 - -
Lan16g0943 267 Gene3D - 1 260 - -
Lan16g0943 267 Pfam Enoyl-(Acyl carrier protein) reductase 15 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0943 Lan-Chr16 16498743 16499965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0943 6 267 Acyl Lipid Metabolism Gene Families AT3G55310 30.686 2.72e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0943 - - gmx:100811279 404.445