Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0940 ATGGCACCACCTGAGATTACTCAAACCATGGCTAAACCATCTTCTACTTTCACCAACAAGCCAAAAACACTTCCACGTCATGCTTACGTCACATTTCTAGCTGGAAATGGTGACTACGTGAATGGTGTGATTGGTTTGGTGAAAGGGTTAAGGAAAGTGAAAAGTGAGTACCCTTTGGTTGTGGCGGTGCTGCCAGATGTACCCATTGACCACCGTCAGATGTTGGAGGATCAGGGCTGTGTTGTCCGTCAGATCGAACCGGTTTATCCACCGGAGAATAAGGGTACTCACTATGCTATGGCGTATTACGTCATTAATTATTCTAAGCTTCGTATATGGGAGTTTGTAGAATACAACAAAATGATCTACTTAGATGGTGACATTCAAGTGTTTGAAAACATAGATCACTTATTTGACATGCCAAATGGTAACTTTTATGCTGTTATGGACTGTTTCTGTGAAAAGACATGGAATCATACCCCACAATACAAAATAGGGTATTGCCAACAATGTCCTAATAAGGTACAATGGCCTAAAGAATTGGGACAACCACCTTCTAAGTACTTCAATGCTGGAATGTTTGTGTTTGAGCCTAGCATGGACACTTATTATGACCTATTGAGGACCCTTAAAGTTACCCCTCCTACACCATTTGCAGAACAAGATTTCTTGAATATGTACTTTAAGGACATTTATAGGCCAATTCCCTTGGTTTATAACCTTGTTCTTGCAATGTTGTGGCGTCACCCTGAGAATGTGGACCTTGATAAAGTTAAGGTTGTTCACTATTGTGCTGCGGGATCAAAGCCATGGAGGTATACAGGGAAAGAAGAAAATATGCAAAGAGAGGACATAAAAATGCTAGTGAAGAAATGGTGGGAAATTTATAATGATGATTCCCTTGATTACAAGAAATCATTGAATGTGACAGAAGAGCCAAATGATGGTGTTGACATTGAACCATTCTCAAAGGTTCTATCAGTGGTTGGAAAAGTTCAATATGTAACAGCACCTTCAGCTGCTTAG 1026 0.4025 MAPPEITQTMAKPSSTFTNKPKTLPRHAYVTFLAGNGDYVNGVIGLVKGLRKVKSEYPLVVAVLPDVPIDHRQMLEDQGCVVRQIEPVYPPENKGTHYAMAYYVINYSKLRIWEFVEYNKMIYLDGDIQVFENIDHLFDMPNGNFYAVMDCFCEKTWNHTPQYKIGYCQQCPNKVQWPKELGQPPSKYFNAGMFVFEPSMDTYYDLLRTLKVTPPTPFAEQDFLNMYFKDIYRPIPLVYNLVLAMLWRHPENVDLDKVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVKKWWEIYNDDSLDYKKSLNVTEEPNDGVDIEPFSKVLSVVGKVQYVTAPSAA* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0940 341 CDD GT8_Glycogenin 27 298 - -
Lan16g0940 341 PANTHER GALACTINOL SYNTHASE 1 1 341 - -
Lan16g0940 341 Pfam Glycosyl transferase family 8 31 274 IPR002495 GO:0016757
Lan16g0940 341 SUPERFAMILY Nucleotide-diphospho-sugar transferases 29 304 IPR029044 -
Lan16g0940 341 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 341 - -
Lan16g0940 341 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 25 305 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0940 Lan-Chr16 16462195 16465859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0940 4 341 Glycosyltransferase AT1G56600 71.976 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0940 K18819 - gmx:100809287 578.556