Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0937 ATGGAAAATAGACCAGATCCTGATATTGACGACGATGATTTTCTTGACCTTTATAAGGAGTACACTGGCCCTTTGGGATCTGCTCCAACCAATACACAAGAGAAGGCTAAATCAAACAAAAGGTCAAATGCAGGGTCTGACGAGGAGGAGGAGGAGTCTCGTGATCCTAATGCTGTACCAACTGATTTCACCAGCCGGGAAGCTAAGGTTTGGGAGGCTAAGTCAAAGGCCACTGAGAGGAATTGGAAGAAAAGAAAGGAAGAGGAAATGATCTGCAAACTTTGTGGAGAATCAGGGCATTTCACTCAGGGTTGTCCATCTACTCTTGGAGCAAATCGCAAATCTCAAGATTTCTTTGAACGGATACCAGCAAGAGACAAACAACTAAGAGCACTCTTTACAGAGAAAGTTATAACCAAGATTGAAAGGGATATTGGCTGCAAAATTAAGATGGATGAGAAGTTTATTATTGTTAGTGGTAAGGATAGATTAATTTTGGCAAAAGGTGTTGATGCTGTGCACAAGATTAGAGAGGAAGGTGATCAAAGGGGATCTTCTAGTTCTCACATTGCCAGATCAAGGTCACCTGAGAGAAGTCCTGTTAATACTCGGTTCCAACGCTCTGAGCCCCAAAGGTCTCATTCTGGAGGACCGCGAAATCCATCTCACTTTCAACAAAGACTTGGTAGGCAAGAGAGAGCTGTTGAAGACCGTGTGCGGGATGACATCCAAAAGTTTCCAAGAGGTTCTCCACAAGCAAGAGCTTATGGAAATAGTGGAGCTAGAGGTCGTGCAAGCCACTCAAGATCTCCAAGACAGGCCCCTTATACAGGGAACTCATATAATTCATTTGATGGCCGTGACCAAAGCATGGGTGCATACAGGAATGGCGGTTGGGATTCTCATAGAAGAGAATCTGGTATCCAACCTGGTCATCAGTTTGATCATAATGCCTCCTCTCAGACTTTGGAAGAACTAGAATTGGAGTATAAGAAAGAGGCATCAGAGCTAATGAAAATTCGTGACAGGGAAGAAGATGAAGAAAATTTCAAGCATCGTGAGGCTATTAGAGATTTAAGGGAGAATTACATGAACAAAGCTGCTATGTTGAGGGTAACACATGCAAAACAGTGGGAAGAATTTCTTCAGGTTGATGCCCAGAGGCGTGAATTGCAGGCTATGCAACAAATCAATTCTGGTTATGGGGGTTATAAACAACAGAATTTTCCAGAATATGATGATGGCTCCGCTGTCAGTACTCACTATTCTGGGACTAATTTACCCGCAGAATCAAGGAACAGATTCCCAGATACTATGGACACTTATCCTAATAGACCTCATGATAATAATTTTGGTGAATTTCAGAGGCCTGGAGATTTTTCAAAAGCTTACAACAGATATTAA 1404 0.4245 MENRPDPDIDDDDFLDLYKEYTGPLGSAPTNTQEKAKSNKRSNAGSDEEEEESRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERIPARDKQLRALFTEKVITKIERDIGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREEGDQRGSSSSHIARSRSPERSPVNTRFQRSEPQRSHSGGPRNPSHFQQRLGRQERAVEDRVRDDIQKFPRGSPQARAYGNSGARGRASHSRSPRQAPYTGNSYNSFDGRDQSMGAYRNGGWDSHRRESGIQPGHQFDHNASSQTLEELELEYKKEASELMKIRDREEDEENFKHREAIRDLRENYMNKAAMLRVTHAKQWEEFLQVDAQRRELQAMQQINSGYGGYKQQNFPEYDDGSAVSTHYSGTNLPAESRNRFPDTMDTYPNRPHDNNFGEFQRPGDFSKAYNRY* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0937 467 MobiDBLite consensus disorder prediction 25 39 - -
Lan16g0937 467 MobiDBLite consensus disorder prediction 1 15 - -
Lan16g0937 467 MobiDBLite consensus disorder prediction 186 227 - -
Lan16g0937 467 MobiDBLite consensus disorder prediction 1 70 - -
Lan16g0937 467 PANTHER OS01G0252900 PROTEIN 1 467 - -
Lan16g0937 467 MobiDBLite consensus disorder prediction 229 247 - -
Lan16g0937 467 Coils Coil 316 343 - -
Lan16g0937 467 MobiDBLite consensus disorder prediction 263 289 - -
Lan16g0937 467 MobiDBLite consensus disorder prediction 424 467 - -
Lan16g0937 467 ProSiteProfiles Zinc finger CCHC-type profile. 92 107 IPR001878 GO:0003676|GO:0008270
Lan16g0937 467 SUPERFAMILY Retrovirus zinc finger-like domains 79 111 IPR036875 GO:0003676|GO:0008270
Lan16g0937 467 PANTHER OS01G0252900 PROTEIN 1 467 - -
Lan16g0937 467 MobiDBLite consensus disorder prediction 177 321 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0937 - - gmx:100806099 770.77